Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MMP11P24347 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MMP11P24347 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP11P24347 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP11P24347 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.23■□□□□ 0.67
MMP11P24347 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP11P24347 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.23■□□□□ 0.67
MMP11P24347 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP11P24347 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP11P24347 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.23■□□□□ 0.67
MMP11P24347 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.23■□□□□ 0.67
MMP11P24347 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.23■□□□□ 0.67
MMP11P24347 HLA-B-256ENST00000639848 1089 ntBASIC19.23■□□□□ 0.67
MMP11P24347 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.23■□□□□ 0.67
MMP11P24347 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP11P24347 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
MMP11P24347 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP11P24347 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP11P24347 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.22■□□□□ 0.67
MMP11P24347 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.22■□□□□ 0.67
MMP11P24347 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MMP11P24347 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP11P24347 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.22■□□□□ 0.67
MMP11P24347 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.22■□□□□ 0.67
MMP11P24347 AC008687.6-201ENST00000596318 630 ntBASIC19.22■□□□□ 0.67
MMP11P24347 AC066615.1-201ENST00000640911 628 ntBASIC19.22■□□□□ 0.67
MMP11P24347 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP11P24347 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
MMP11P24347 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP11P24347 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP11P24347 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP11P24347 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.22■□□□□ 0.67
MMP11P24347 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MMP11P24347 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MMP11P24347 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.22■□□□□ 0.67
MMP11P24347 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MMP11P24347 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MMP11P24347 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MMP11P24347 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.21■□□□□ 0.67
MMP11P24347 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.21■□□□□ 0.67
MMP11P24347 AC060766.5-201ENST00000590539 871 ntBASIC19.21■□□□□ 0.67
MMP11P24347 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.21■□□□□ 0.67
MMP11P24347 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.21■□□□□ 0.67
MMP11P24347 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.21■□□□□ 0.67
MMP11P24347 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MMP11P24347 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
MMP11P24347 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
MMP11P24347 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.2■□□□□ 0.66
MMP11P24347 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MMP11P24347 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP11P24347 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP11P24347 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
MMP11P24347 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP11P24347 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MMP11P24347 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP11P24347 PRORSD1P-201ENST00000295112 541 ntBASIC19.2■□□□□ 0.66
MMP11P24347 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.2■□□□□ 0.66
MMP11P24347 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MMP11P24347 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.2■□□□□ 0.66
MMP11P24347 AC026366.1-201ENST00000488803 879 ntBASIC19.2■□□□□ 0.66
MMP11P24347 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.2■□□□□ 0.66
MMP11P24347 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MMP11P24347 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MMP11P24347 AC105020.6-201ENST00000621523 1217 ntBASIC19.2■□□□□ 0.66
MMP11P24347 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.2■□□□□ 0.66
MMP11P24347 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MMP11P24347 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP11P24347 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP11P24347 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
MMP11P24347 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MMP11P24347 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.2■□□□□ 0.66
MMP11P24347 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MMP11P24347 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms