Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XPAP23025 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XPAP23025 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
XPAP23025 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XPAP23025 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
XPAP23025 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XPAP23025 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.44■□□□□ 0.86
XPAP23025 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.44■□□□□ 0.86
XPAP23025 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
XPAP23025 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.44■□□□□ 0.86
XPAP23025 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.44■□□□□ 0.86
XPAP23025 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XPAP23025 PLK5-205ENST00000642079 1969 ntBASIC20.44■□□□□ 0.86
XPAP23025 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.44■□□□□ 0.86
XPAP23025 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.44■□□□□ 0.86
XPAP23025 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
XPAP23025 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
XPAP23025 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
XPAP23025 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
XPAP23025 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.43■□□□□ 0.86
XPAP23025 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
XPAP23025 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
XPAP23025 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
XPAP23025 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
XPAP23025 FAM201B-201ENST00000458407 597 ntBASIC20.43■□□□□ 0.86
XPAP23025 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
XPAP23025 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
XPAP23025 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.43■□□□□ 0.86
XPAP23025 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
XPAP23025 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
XPAP23025 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.43■□□□□ 0.86
XPAP23025 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
XPAP23025 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
XPAP23025 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
XPAP23025 AC005229.4-201ENST00000610085 2198 ntBASIC20.42■□□□□ 0.86
XPAP23025 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XPAP23025 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
XPAP23025 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XPAP23025 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
XPAP23025 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.42■□□□□ 0.86
XPAP23025 TSPY20P-201ENST00000450910 630 ntBASIC20.42■□□□□ 0.86
XPAP23025 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.42■□□□□ 0.86
XPAP23025 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.42■□□□□ 0.86
XPAP23025 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
XPAP23025 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.42■□□□□ 0.86
XPAP23025 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
XPAP23025 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
XPAP23025 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
XPAP23025 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
XPAP23025 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.41■□□□□ 0.86
XPAP23025 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.41■□□□□ 0.86
XPAP23025 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.41■□□□□ 0.86
XPAP23025 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 HLA-B-256ENST00000639848 1089 ntBASIC20.41■□□□□ 0.86
XPAP23025 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
XPAP23025 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
XPAP23025 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 AC006128.1-201ENST00000624704 1661 ntBASIC20.41■□□□□ 0.86
XPAP23025 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.41■□□□□ 0.86
XPAP23025 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.41■□□□□ 0.86
XPAP23025 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XPAP23025 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
XPAP23025 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
XPAP23025 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
XPAP23025 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.4■□□□□ 0.86
XPAP23025 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.4■□□□□ 0.86
XPAP23025 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.4■□□□□ 0.86
XPAP23025 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
XPAP23025 AC092368.3-202ENST00000574180 1591 ntBASIC20.4■□□□□ 0.86
XPAP23025 AC060766.5-201ENST00000590539 871 ntBASIC20.4■□□□□ 0.86
XPAP23025 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XPAP23025 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
XPAP23025 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
XPAP23025 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
XPAP23025 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.39■□□□□ 0.86
XPAP23025 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
XPAP23025 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms