Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS4Y1P22090 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.61■□□□□ 0.57
RPS4Y1P22090 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.61■□□□□ 0.57
RPS4Y1P22090 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.61■□□□□ 0.57
RPS4Y1P22090 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS4Y1P22090 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.61■□□□□ 0.57
RPS4Y1P22090 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
RPS4Y1P22090 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y1P22090 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y1P22090 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.61■□□□□ 0.57
RPS4Y1P22090 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.6■□□□□ 0.57
RPS4Y1P22090 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.6■□□□□ 0.57
RPS4Y1P22090 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y1P22090 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.6■□□□□ 0.57
RPS4Y1P22090 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y1P22090 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RPS4Y1P22090 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y1P22090 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y1P22090 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y1P22090 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.6■□□□□ 0.57
RPS4Y1P22090 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y1P22090 AC022517.1-201ENST00000592429 346 ntBASIC18.6■□□□□ 0.57
RPS4Y1P22090 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.6■□□□□ 0.57
RPS4Y1P22090 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y1P22090 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y1P22090 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.6■□□□□ 0.57
RPS4Y1P22090 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y1P22090 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4Y1P22090 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.59■□□□□ 0.57
RPS4Y1P22090 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y1P22090 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.59■□□□□ 0.57
RPS4Y1P22090 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RPS4Y1P22090 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4Y1P22090 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RPS4Y1P22090 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y1P22090 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4Y1P22090 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y1P22090 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y1P22090 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.59■□□□□ 0.57
RPS4Y1P22090 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4Y1P22090 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.59■□□□□ 0.57
RPS4Y1P22090 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y1P22090 BX119927.1-201ENST00000636596 1552 ntBASIC18.59■□□□□ 0.57
RPS4Y1P22090 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y1P22090 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.58■□□□□ 0.57
RPS4Y1P22090 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RPS4Y1P22090 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RPS4Y1P22090 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.58■□□□□ 0.57
RPS4Y1P22090 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4Y1P22090 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4Y1P22090 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.58■□□□□ 0.56
RPS4Y1P22090 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.58■□□□□ 0.56
RPS4Y1P22090 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.58■□□□□ 0.56
RPS4Y1P22090 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4Y1P22090 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RPS4Y1P22090 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
RPS4Y1P22090 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4Y1P22090 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4Y1P22090 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4Y1P22090 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.58■□□□□ 0.56
RPS4Y1P22090 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RPS4Y1P22090 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y1P22090 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y1P22090 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.57■□□□□ 0.56
RPS4Y1P22090 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y1P22090 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y1P22090 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.57■□□□□ 0.56
RPS4Y1P22090 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y1P22090 AC007322.1-201ENST00000426983 750 ntBASIC18.57■□□□□ 0.56
RPS4Y1P22090 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y1P22090 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.57■□□□□ 0.56
RPS4Y1P22090 AC069236.1-201ENST00000604339 616 ntBASIC18.57■□□□□ 0.56
RPS4Y1P22090 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.57■□□□□ 0.56
RPS4Y1P22090 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.57■□□□□ 0.56
RPS4Y1P22090 AC105020.6-201ENST00000621523 1217 ntBASIC18.57■□□□□ 0.56
RPS4Y1P22090 AC092437.1-201ENST00000624794 1048 ntBASIC18.57■□□□□ 0.56
RPS4Y1P22090 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y1P22090 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y1P22090 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y1P22090 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.57■□□□□ 0.56
RPS4Y1P22090 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.57■□□□□ 0.56
RPS4Y1P22090 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 PTBP1P-201ENST00000554374 1601 ntBASIC18.56■□□□□ 0.56
RPS4Y1P22090 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4Y1P22090 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4Y1P22090 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4Y1P22090 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4Y1P22090 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4Y1P22090 CYP2T3P-201ENST00000601990 817 ntBASIC18.56■□□□□ 0.56
RPS4Y1P22090 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
RPS4Y1P22090 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms