Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT4P19013 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT4P19013 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT4P19013 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT4P19013 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT4P19013 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT4P19013 AC245052.3-201ENST00000450182 901 ntBASIC20.3■□□□□ 0.84
KRT4P19013 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.3■□□□□ 0.84
KRT4P19013 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT4P19013 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT4P19013 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT4P19013 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
KRT4P19013 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
KRT4P19013 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT4P19013 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT4P19013 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT4P19013 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT4P19013 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT4P19013 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT4P19013 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT4P19013 AC116050.2-201ENST00000612102 1779 ntBASIC20.29■□□□□ 0.84
KRT4P19013 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KRT4P19013 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT4P19013 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
KRT4P19013 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
KRT4P19013 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT4P19013 AC012414.1-201ENST00000556676 535 ntBASIC20.29■□□□□ 0.84
KRT4P19013 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.29■□□□□ 0.84
KRT4P19013 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.29■□□□□ 0.84
KRT4P19013 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
KRT4P19013 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT4P19013 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT4P19013 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT4P19013 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT4P19013 KRT16P2-201ENST00000414673 1423 ntBASIC20.28■□□□□ 0.84
KRT4P19013 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT4P19013 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT4P19013 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT4P19013 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KRT4P19013 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT4P19013 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KRT4P19013 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT4P19013 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT4P19013 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.28■□□□□ 0.84
KRT4P19013 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT4P19013 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
KRT4P19013 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT4P19013 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
KRT4P19013 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT4P19013 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT4P19013 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
KRT4P19013 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT4P19013 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
KRT4P19013 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 AL691432.2-201ENST00000607222 2038 ntBASIC20.27■□□□□ 0.84
KRT4P19013 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 AP000974.1-201ENST00000623909 2387 ntBASIC20.27■□□□□ 0.84
KRT4P19013 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
KRT4P19013 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.27■□□□□ 0.84
KRT4P19013 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.27■□□□□ 0.84
KRT4P19013 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT4P19013 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT4P19013 TPRG1LP1-201ENST00000598702 760 ntBASIC20.27■□□□□ 0.84
KRT4P19013 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
KRT4P19013 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT4P19013 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT4P19013 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT4P19013 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.27■□□□□ 0.83
KRT4P19013 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
KRT4P19013 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT4P19013 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT4P19013 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT4P19013 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 AP001330.3-201ENST00000520123 633 ntBASIC20.26■□□□□ 0.83
KRT4P19013 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT4P19013 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT4P19013 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KRT4P19013 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KRT4P19013 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms