Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 SMC2YFR031C 3513 nt2.42□□□□□ -2.02
CDC43P18898 RGA2YDR379W 3030 nt2.42□□□□□ -2.02
CDC43P18898 MUK1YPL070W 1839 nt2.41□□□□□ -2.02
CDC43P18898 SNC2YOR327C 348 nt2.41□□□□□ -2.02
CDC43P18898 YBR131C-AYBR131C-A 90 nt2.41□□□□□ -2.02
CDC43P18898 GPI13YLL031C 3054 nt2.41□□□□□ -2.02
CDC43P18898 UBP11YKR098C 2154 nt2.4□□□□□ -2.02
CDC43P18898 ATG13YPR185W 2217 nt2.4□□□□□ -2.03
CDC43P18898 INP52YNL106C 3552 nt2.4□□□□□ -2.03
CDC43P18898 snR76snR76 109 nt2.4□□□□□ -2.03
CDC43P18898 PXA2YKL188C 2562 nt2.4□□□□□ -2.03
CDC43P18898 NOP4YPL043W 2058 nt2.4□□□□□ -2.03
CDC43P18898 SSQ1YLR369W 1974 nt2.4□□□□□ -2.03
CDC43P18898 RAX2YLR084C 3663 nt2.39□□□□□ -2.03
CDC43P18898 PEX8YGR077C 1770 nt2.39□□□□□ -2.03
CDC43P18898 YEL043WYEL043W 2871 nt2.39□□□□□ -2.03
CDC43P18898 IES6YEL044W 501 nt2.39□□□□□ -2.03
CDC43P18898 YAL042C-AYAL042C-A 378 nt2.39□□□□□ -2.03
CDC43P18898 SPO22YIL073C 2928 nt2.39□□□□□ -2.03
CDC43P18898 TFC4YGR047C 3078 nt2.39□□□□□ -2.03
CDC43P18898 PTC5YOR090C 1719 nt2.39□□□□□ -2.03
CDC43P18898 SEC5YDR166C 2916 nt2.38□□□□□ -2.03
CDC43P18898 DNL4YOR005C 2835 nt2.38□□□□□ -2.03
CDC43P18898 RIX1YHR197W 2292 nt2.38□□□□□ -2.03
CDC43P18898 PSY2YNL201C 2577 nt2.38□□□□□ -2.03
CDC43P18898 VTC1YER072W 390 nt2.38□□□□□ -2.03
CDC43P18898 BNR1YIL159W 4128 nt2.38□□□□□ -2.03
CDC43P18898 RGR1YLR071C 3249 nt2.38□□□□□ -2.03
CDC43P18898 YLR149CYLR149C 2193 nt2.38□□□□□ -2.03
CDC43P18898 SGF11YPL047W 300 nt2.38□□□□□ -2.03
CDC43P18898 ATG11YPR049C 3537 nt2.38□□□□□ -2.03
CDC43P18898 SPT21YMR179W 2277 nt2.38□□□□□ -2.03
CDC43P18898 DSE4YNR067C 3354 nt2.38□□□□□ -2.03
CDC43P18898 REC8YPR007C 2043 nt2.37□□□□□ -2.03
CDC43P18898 SAP1YER047C 2694 nt2.37□□□□□ -2.03
CDC43P18898 STB4YMR019W 2850 nt2.37□□□□□ -2.03
CDC43P18898 CHS2YBR038W 2892 nt2.37□□□□□ -2.03
CDC43P18898 CFT2YLR115W 2580 nt2.37□□□□□ -2.03
CDC43P18898 LRE1YCL051W 1752 nt2.37□□□□□ -2.03
CDC43P18898 VMA9YCL005W-A 222 nt2.37□□□□□ -2.03
CDC43P18898 CUL3YGR003W 2235 nt2.37□□□□□ -2.03
CDC43P18898 NFT1YKR103W 3657 nt2.37□□□□□ -2.03
CDC43P18898 VPS34YLR240W 2628 nt2.37□□□□□ -2.03
CDC43P18898 RPL23BYER117W 414 nt2.36□□□□□ -2.03
CDC43P18898 RPS27BYHR021C 249 nt2.36□□□□□ -2.03
CDC43P18898 YHR086W-AYHR086W-A 162 nt2.36□□□□□ -2.03
CDC43P18898 RPL20AYMR242C 519 nt2.36□□□□□ -2.03
CDC43P18898 TAF2YCR042C 4224 nt2.36□□□□□ -2.03
CDC43P18898 RRP12YPL012W 3687 nt2.36□□□□□ -2.03
CDC43P18898 PRP6YBR055C 2700 nt2.36□□□□□ -2.03
CDC43P18898 SOK1YDR006C 2706 nt2.35□□□□□ -2.03
CDC43P18898 JSN1YJR091C 3276 nt2.35□□□□□ -2.03
CDC43P18898 YBL053WYBL053W 375 nt2.35□□□□□ -2.03
CDC43P18898 YPR203WYPR203W 309 nt2.35□□□□□ -2.03
CDC43P18898 SEF1YBL066C 3447 nt2.35□□□□□ -2.03
CDC43P18898 SUL1YBR294W 2580 nt2.35□□□□□ -2.03
CDC43P18898 PSK2YOL045W 3306 nt2.35□□□□□ -2.03
CDC43P18898 ECM29YHL030W 5607 nt2.35□□□□□ -2.03
CDC43P18898 NIP100YPL174C 2607 nt2.35□□□□□ -2.03
CDC43P18898 SPO75YLL005C 2607 nt2.34□□□□□ -2.03
CDC43P18898 ROG1YGL144C 2058 nt2.34□□□□□ -2.03
CDC43P18898 INP2YMR163C 2118 nt2.34□□□□□ -2.03
CDC43P18898 YOR381W-AYOR381W-A 168 nt2.34□□□□□ -2.03
CDC43P18898 SWA2YDR320C 2007 nt2.34□□□□□ -2.04
CDC43P18898 BPT1YLL015W 4680 nt2.33□□□□□ -2.04
CDC43P18898 PMR1YGL167C 2853 nt2.33□□□□□ -2.04
CDC43P18898 EFR3YMR212C 2349 nt2.33□□□□□ -2.04
CDC43P18898 GIS1YDR096W 2685 nt2.33□□□□□ -2.04
CDC43P18898 YPR089WYPR089W 2667 nt2.33□□□□□ -2.04
CDC43P18898 SWR1YDR334W 4545 nt2.32□□□□□ -2.04
CDC43P18898 CYR1YJL005W 6081 nt2.32□□□□□ -2.04
CDC43P18898 STE23YLR389C 3084 nt2.32□□□□□ -2.04
CDC43P18898 CLN3YAL040C 1743 nt2.32□□□□□ -2.04
CDC43P18898 SRB8YCR081W 4284 nt2.32□□□□□ -2.04
CDC43P18898 PNC1YGL037C 651 nt2.32□□□□□ -2.04
CDC43P18898 snR52snR52 92 nt2.32□□□□□ -2.04
CDC43P18898 AI2Q0055 2565 nt2.32□□□□□ -2.04
CDC43P18898 GRR1YJR090C 3456 nt2.32□□□□□ -2.04
CDC43P18898 NET1YJL076W 3570 nt2.31□□□□□ -2.04
CDC43P18898 TRA1YHR099W 11235 nt2.31□□□□□ -2.04
CDC43P18898 SPC98YNL126W 2541 nt2.31□□□□□ -2.04
CDC43P18898 snR72snR72 98 nt2.31□□□□□ -2.04
CDC43P18898 YDR209CYDR209C 414 nt2.31□□□□□ -2.04
CDC43P18898 LCL1YPL056C 306 nt2.31□□□□□ -2.04
CDC43P18898 YBR178WYBR178W 375 nt2.31□□□□□ -2.04
CDC43P18898 YIL082W-AYIL082W-A 4497 nt2.31□□□□□ -2.04
CDC43P18898 RTT10YPL183C 3042 nt2.31□□□□□ -2.04
CDC43P18898 IRR1YIL026C 3453 nt2.3□□□□□ -2.04
CDC43P18898 YLR146W-AYLR146W-A 189 nt2.3□□□□□ -2.04
CDC43P18898 YNL114CYNL114C 372 nt2.3□□□□□ -2.04
CDC43P18898 RPS12YOR369C 432 nt2.3□□□□□ -2.04
CDC43P18898 DRS2YAL026C 4068 nt2.3□□□□□ -2.04
CDC43P18898 YTA7YGR270W 4140 nt2.3□□□□□ -2.04
CDC43P18898 KSP1YHR082C 3090 nt2.3□□□□□ -2.04
CDC43P18898 PEP3YLR148W 2757 nt2.29□□□□□ -2.04
CDC43P18898 BAS1YKR099W 2436 nt2.29□□□□□ -2.04
CDC43P18898 HEH2YDR458C 1992 nt2.29□□□□□ -2.04
CDC43P18898 FMP16YDR070C 282 nt2.29□□□□□ -2.04
CDC43P18898 COX14YML129C 213 nt2.29□□□□□ -2.04
CDC43P18898 YBR277CYBR277C 402 nt2.29□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 61.3 ms