Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC093787.1-201ENST00000450396 207 ntBASIC21.28■■□□□ 1
PDGFRAP16234 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PDGFRAP16234 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.28■■□□□ 1
PDGFRAP16234 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
PDGFRAP16234 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDGFRAP16234 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFRAP16234 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.28■■□□□ 1
PDGFRAP16234 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.28■■□□□ 1
PDGFRAP16234 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDGFRAP16234 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFRAP16234 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
PDGFRAP16234 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFRAP16234 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
PDGFRAP16234 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
PDGFRAP16234 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.27■■□□□ 1
PDGFRAP16234 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.27■■□□□ 1
PDGFRAP16234 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PDGFRAP16234 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.27■■□□□ 1
PDGFRAP16234 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 AL512625.2-201ENST00000417533 625 ntBASIC21.27■■□□□ 1
PDGFRAP16234 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.27■■□□□ 1
PDGFRAP16234 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.27■■□□□ 1
PDGFRAP16234 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.27■■□□□ 1
PDGFRAP16234 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.27■■□□□ 1
PDGFRAP16234 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
PDGFRAP16234 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.27■■□□□ 1
PDGFRAP16234 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PDGFRAP16234 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 AC010980.2-201ENST00000587099 1412 ntBASIC21.27■■□□□ 1
PDGFRAP16234 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFRAP16234 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.27■□□□□ 0.99
PDGFRAP16234 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.27■□□□□ 0.99
PDGFRAP16234 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDGFRAP16234 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PDGFRAP16234 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.26■□□□□ 0.99
PDGFRAP16234 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.26■□□□□ 0.99
PDGFRAP16234 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFRAP16234 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFRAP16234 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PDGFRAP16234 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.26■□□□□ 0.99
PDGFRAP16234 KRT18P68-201ENST00000392293 1000 ntBASIC21.26■□□□□ 0.99
PDGFRAP16234 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFRAP16234 AL355472.2-201ENST00000422958 438 ntBASIC21.26■□□□□ 0.99
PDGFRAP16234 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PDGFRAP16234 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFRAP16234 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.26■□□□□ 0.99
PDGFRAP16234 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFRAP16234 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFRAP16234 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFRAP16234 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFRAP16234 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFRAP16234 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFRAP16234 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFRAP16234 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFRAP16234 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.25■□□□□ 0.99
PDGFRAP16234 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PDGFRAP16234 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFRAP16234 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.25■□□□□ 0.99
PDGFRAP16234 SLC29A4P1-201ENST00000398760 971 ntBASIC21.25■□□□□ 0.99
PDGFRAP16234 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFRAP16234 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PDGFRAP16234 AL512408.1-201ENST00000569378 2000 ntBASIC21.25■□□□□ 0.99
PDGFRAP16234 CYP2T3P-201ENST00000601990 817 ntBASIC21.25■□□□□ 0.99
PDGFRAP16234 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PDGFRAP16234 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PDGFRAP16234 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFRAP16234 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFRAP16234 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFRAP16234 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFRAP16234 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PDGFRAP16234 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFRAP16234 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFRAP16234 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.25■□□□□ 0.99
PDGFRAP16234 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFRAP16234 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFRAP16234 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFRAP16234 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PDGFRAP16234 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.24■□□□□ 0.99
PDGFRAP16234 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFRAP16234 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
PDGFRAP16234 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.24■□□□□ 0.99
PDGFRAP16234 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.24■□□□□ 0.99
PDGFRAP16234 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
PDGFRAP16234 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.24■□□□□ 0.99
PDGFRAP16234 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.24■□□□□ 0.99
PDGFRAP16234 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFRAP16234 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PDGFRAP16234 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms