Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.1■□□□□ 0.97
H2AFXP16104 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.1■□□□□ 0.97
H2AFXP16104 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 AC006455.2-201ENST00000429931 906 ntBASIC21.1■□□□□ 0.97
H2AFXP16104 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
H2AFXP16104 MIR4508-201ENST00000584178 70 ntBASIC21.1■□□□□ 0.97
H2AFXP16104 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
H2AFXP16104 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2AFXP16104 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.1■□□□□ 0.97
H2AFXP16104 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2AFXP16104 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.09■□□□□ 0.97
H2AFXP16104 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2AFXP16104 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
H2AFXP16104 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
H2AFXP16104 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
H2AFXP16104 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.09■□□□□ 0.97
H2AFXP16104 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.09■□□□□ 0.97
H2AFXP16104 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.09■□□□□ 0.97
H2AFXP16104 AC018470.1-201ENST00000624790 3129 ntBASIC21.09■□□□□ 0.97
H2AFXP16104 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
H2AFXP16104 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.09■□□□□ 0.97
H2AFXP16104 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2AFXP16104 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2AFXP16104 AC055733.4-201ENST00000638462 1354 ntBASIC21.09■□□□□ 0.97
H2AFXP16104 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.09■□□□□ 0.97
H2AFXP16104 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2AFXP16104 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
H2AFXP16104 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.08■□□□□ 0.97
H2AFXP16104 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.08■□□□□ 0.97
H2AFXP16104 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2AFXP16104 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.08■□□□□ 0.97
H2AFXP16104 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2AFXP16104 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2AFXP16104 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2AFXP16104 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
H2AFXP16104 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
H2AFXP16104 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.08■□□□□ 0.97
H2AFXP16104 AC010980.1-201ENST00000587192 1142 ntBASIC21.08■□□□□ 0.97
H2AFXP16104 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.08■□□□□ 0.97
H2AFXP16104 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
H2AFXP16104 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.08■□□□□ 0.96
H2AFXP16104 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.08■□□□□ 0.96
H2AFXP16104 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
H2AFXP16104 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
H2AFXP16104 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
H2AFXP16104 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.08■□□□□ 0.96
H2AFXP16104 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
H2AFXP16104 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
H2AFXP16104 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
H2AFXP16104 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.07■□□□□ 0.96
H2AFXP16104 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
H2AFXP16104 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H2AFXP16104 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2AFXP16104 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
H2AFXP16104 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.06■□□□□ 0.96
H2AFXP16104 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.06■□□□□ 0.96
H2AFXP16104 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H2AFXP16104 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.06■□□□□ 0.96
H2AFXP16104 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.06■□□□□ 0.96
H2AFXP16104 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2AFXP16104 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
H2AFXP16104 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
H2AFXP16104 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
H2AFXP16104 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.06■□□□□ 0.96
H2AFXP16104 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2AFXP16104 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2AFXP16104 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2AFXP16104 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.05■□□□□ 0.96
H2AFXP16104 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2AFXP16104 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.05■□□□□ 0.96
H2AFXP16104 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.05■□□□□ 0.96
H2AFXP16104 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H2AFXP16104 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.05■□□□□ 0.96
H2AFXP16104 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.05■□□□□ 0.96
H2AFXP16104 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.05■□□□□ 0.96
H2AFXP16104 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2AFXP16104 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms