Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA4P12838 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA4P12838 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.42■□□□□ 0.22
DEFA4P12838 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.42■□□□□ 0.22
DEFA4P12838 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.42■□□□□ 0.22
DEFA4P12838 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.42■□□□□ 0.22
DEFA4P12838 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DEFA4P12838 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.42■□□□□ 0.22
DEFA4P12838 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DEFA4P12838 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA4P12838 AC121338.2-201ENST00000622535 1744 ntBASIC16.42■□□□□ 0.22
DEFA4P12838 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA4P12838 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA4P12838 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
DEFA4P12838 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEFA4P12838 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
DEFA4P12838 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DEFA4P12838 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.41■□□□□ 0.22
DEFA4P12838 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEFA4P12838 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DEFA4P12838 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DEFA4P12838 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DEFA4P12838 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DEFA4P12838 AC123595.1-201ENST00000440769 1046 ntBASIC16.41■□□□□ 0.22
DEFA4P12838 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DEFA4P12838 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.41■□□□□ 0.22
DEFA4P12838 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.41■□□□□ 0.22
DEFA4P12838 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.41■□□□□ 0.22
DEFA4P12838 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEFA4P12838 AC061975.6-201ENST00000579045 1553 ntBASIC16.41■□□□□ 0.22
DEFA4P12838 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DEFA4P12838 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.41■□□□□ 0.22
DEFA4P12838 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.41■□□□□ 0.22
DEFA4P12838 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEFA4P12838 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DEFA4P12838 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.4■□□□□ 0.22
DEFA4P12838 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DEFA4P12838 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DEFA4P12838 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.4■□□□□ 0.22
DEFA4P12838 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
DEFA4P12838 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.4■□□□□ 0.22
DEFA4P12838 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DEFA4P12838 YBX1P1-201ENST00000445822 960 ntBASIC16.4■□□□□ 0.22
DEFA4P12838 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.4■□□□□ 0.22
DEFA4P12838 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DEFA4P12838 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DEFA4P12838 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DEFA4P12838 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
DEFA4P12838 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.4■□□□□ 0.22
DEFA4P12838 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DEFA4P12838 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DEFA4P12838 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DEFA4P12838 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DEFA4P12838 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.4■□□□□ 0.22
DEFA4P12838 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.4■□□□□ 0.22
DEFA4P12838 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DEFA4P12838 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.39■□□□□ 0.22
DEFA4P12838 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.39■□□□□ 0.21
DEFA4P12838 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DEFA4P12838 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DEFA4P12838 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DEFA4P12838 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.39■□□□□ 0.21
DEFA4P12838 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DEFA4P12838 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.39■□□□□ 0.21
DEFA4P12838 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DEFA4P12838 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DEFA4P12838 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DEFA4P12838 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DEFA4P12838 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.39■□□□□ 0.21
DEFA4P12838 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
DEFA4P12838 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DEFA4P12838 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.39■□□□□ 0.21
DEFA4P12838 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DEFA4P12838 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
DEFA4P12838 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
DEFA4P12838 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DEFA4P12838 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DEFA4P12838 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DEFA4P12838 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.38■□□□□ 0.21
DEFA4P12838 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.38■□□□□ 0.21
DEFA4P12838 TERF1P2-201ENST00000583350 1212 ntBASIC16.38■□□□□ 0.21
DEFA4P12838 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.38■□□□□ 0.21
DEFA4P12838 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.38■□□□□ 0.21
DEFA4P12838 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DEFA4P12838 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DEFA4P12838 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.38■□□□□ 0.21
DEFA4P12838 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
DEFA4P12838 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms