Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THRAP10827 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THRAP10827 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.27■□□□□ 0.84
THRAP10827 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.27■□□□□ 0.84
THRAP10827 AC133041.1-202ENST00000642053 222 ntBASIC20.27■□□□□ 0.84
THRAP10827 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THRAP10827 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.27■□□□□ 0.84
THRAP10827 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
THRAP10827 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
THRAP10827 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
THRAP10827 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.26■□□□□ 0.83
THRAP10827 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THRAP10827 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THRAP10827 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.26■□□□□ 0.83
THRAP10827 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
THRAP10827 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
THRAP10827 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
THRAP10827 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.26■□□□□ 0.83
THRAP10827 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
THRAP10827 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
THRAP10827 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THRAP10827 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.26■□□□□ 0.83
THRAP10827 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
THRAP10827 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
THRAP10827 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
THRAP10827 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
THRAP10827 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THRAP10827 KRT16P2-201ENST00000414673 1423 ntBASIC20.26■□□□□ 0.83
THRAP10827 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.26■□□□□ 0.83
THRAP10827 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THRAP10827 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
THRAP10827 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
THRAP10827 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.25■□□□□ 0.83
THRAP10827 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.25■□□□□ 0.83
THRAP10827 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
THRAP10827 OR10C1-204ENST00000622521 1039 ntBASIC20.25■□□□□ 0.83
THRAP10827 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.25■□□□□ 0.83
THRAP10827 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.25■□□□□ 0.83
THRAP10827 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
THRAP10827 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
THRAP10827 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
THRAP10827 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
THRAP10827 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.24■□□□□ 0.83
THRAP10827 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.24■□□□□ 0.83
THRAP10827 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.24■□□□□ 0.83
THRAP10827 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
THRAP10827 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.24■□□□□ 0.83
THRAP10827 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
THRAP10827 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
THRAP10827 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
THRAP10827 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.24■□□□□ 0.83
THRAP10827 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.24■□□□□ 0.83
THRAP10827 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.23■□□□□ 0.83
THRAP10827 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 MKRN4P-201ENST00000444706 1521 ntBASIC20.23■□□□□ 0.83
THRAP10827 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.23■□□□□ 0.83
THRAP10827 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.23■□□□□ 0.83
THRAP10827 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
THRAP10827 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
THRAP10827 AC098934.4-201ENST00000564127 592 ntBASIC20.23■□□□□ 0.83
THRAP10827 AC069236.1-201ENST00000604339 616 ntBASIC20.23■□□□□ 0.83
THRAP10827 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.23■□□□□ 0.83
THRAP10827 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.23■□□□□ 0.83
THRAP10827 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.23■□□□□ 0.83
THRAP10827 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.23■□□□□ 0.83
THRAP10827 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.23■□□□□ 0.83
THRAP10827 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.23■□□□□ 0.83
THRAP10827 AC008694.1-202ENST00000636953 945 ntBASIC20.23■□□□□ 0.83
THRAP10827 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms