Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSIG8P0DPA2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.33■□□□□ 0.37
VSIG8P0DPA2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSIG8P0DPA2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.33■□□□□ 0.36
VSIG8P0DPA2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.33■□□□□ 0.36
VSIG8P0DPA2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSIG8P0DPA2 SUDS3P1-201ENST00000505831 966 ntBASIC17.33■□□□□ 0.36
VSIG8P0DPA2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSIG8P0DPA2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSIG8P0DPA2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSIG8P0DPA2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
VSIG8P0DPA2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSIG8P0DPA2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 SLC7A5P2-201ENST00000553010 536 ntBASIC17.32■□□□□ 0.36
VSIG8P0DPA2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSIG8P0DPA2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 IRS3P-201ENST00000223076 1006 ntBASIC17.31■□□□□ 0.36
VSIG8P0DPA2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.31■□□□□ 0.36
VSIG8P0DPA2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 DPP3P2-201ENST00000416030 1696 ntBASIC17.3■□□□□ 0.36
VSIG8P0DPA2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 DUX4L2-201ENST00000561772 1275 ntBASIC17.3■□□□□ 0.36
VSIG8P0DPA2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 DUX4L6-201ENST00000626483 1275 ntBASIC17.3■□□□□ 0.36
VSIG8P0DPA2 DUX4L1-201ENST00000627662 1275 ntBASIC17.3■□□□□ 0.36
VSIG8P0DPA2 DUX4L8-201ENST00000629013 1275 ntBASIC17.3■□□□□ 0.36
VSIG8P0DPA2 DUX4L3-201ENST00000630187 1275 ntBASIC17.3■□□□□ 0.36
VSIG8P0DPA2 DUX4L7-201ENST00000630678 1275 ntBASIC17.3■□□□□ 0.36
VSIG8P0DPA2 DUX4L5-201ENST00000630834 1275 ntBASIC17.3■□□□□ 0.36
VSIG8P0DPA2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 AL691432.2-201ENST00000607222 2038 ntBASIC17.3■□□□□ 0.36
VSIG8P0DPA2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 KRT8P36-201ENST00000489121 1440 ntBASIC17.3■□□□□ 0.36
VSIG8P0DPA2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSIG8P0DPA2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSIG8P0DPA2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms