Protein–RNA interactions for Protein: P0C2I8

TY1A-LR4, Transposon Ty1-LR4 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR4P0C2I8 YBR131C-AYBR131C-A 90 nt2.93□□□□□ -1.94
TY1A-LR4P0C2I8 SPO71YDR104C 3738 nt2.93□□□□□ -1.94
TY1A-LR4P0C2I8 GCN1YGL195W 8019 nt2.93□□□□□ -1.94
TY1A-LR4P0C2I8 TAE2YPL009C 3117 nt2.93□□□□□ -1.94
TY1A-LR4P0C2I8 SWA2YDR320C 2007 nt2.93□□□□□ -1.94
TY1A-LR4P0C2I8 PXA2YKL188C 2562 nt2.93□□□□□ -1.94
TY1A-LR4P0C2I8 RPS27BYHR021C 249 nt2.92□□□□□ -1.94
TY1A-LR4P0C2I8 NOP10YHR072W-A 177 nt2.92□□□□□ -1.94
TY1A-LR4P0C2I8 CRS5YOR031W 210 nt2.92□□□□□ -1.94
TY1A-LR4P0C2I8 YOR218CYOR218C 420 nt2.92□□□□□ -1.94
TY1A-LR4P0C2I8 RRM3YHR031C 2172 nt2.92□□□□□ -1.94
TY1A-LR4P0C2I8 INP52YNL106C 3552 nt2.91□□□□□ -1.94
TY1A-LR4P0C2I8 GCV2YMR189W 3105 nt2.91□□□□□ -1.94
TY1A-LR4P0C2I8 TMA19YKL056C 504 nt2.91□□□□□ -1.94
TY1A-LR4P0C2I8 RPB10YOR210W 213 nt2.91□□□□□ -1.94
TY1A-LR4P0C2I8 SGF11YPL047W 300 nt2.91□□□□□ -1.94
TY1A-LR4P0C2I8 DUG2YBR281C 2637 nt2.91□□□□□ -1.94
TY1A-LR4P0C2I8 SLY1YDR189W 2001 nt2.91□□□□□ -1.94
TY1A-LR4P0C2I8 LOS1YKL205W 3303 nt2.91□□□□□ -1.94
TY1A-LR4P0C2I8 TAO3YIL129C 7131 nt2.91□□□□□ -1.94
TY1A-LR4P0C2I8 CRM1YGR218W 3255 nt2.9□□□□□ -1.95
TY1A-LR4P0C2I8 snR74snR74 88 nt2.9□□□□□ -1.95
TY1A-LR4P0C2I8 MDN1YLR106C 14733 nt2.9□□□□□ -1.95
TY1A-LR4P0C2I8 HEH2YDR458C 1992 nt2.9□□□□□ -1.95
TY1A-LR4P0C2I8 CUL3YGR003W 2235 nt2.89□□□□□ -1.95
TY1A-LR4P0C2I8 YEL043WYEL043W 2871 nt2.89□□□□□ -1.95
TY1A-LR4P0C2I8 SCH9YHR205W 2475 nt2.89□□□□□ -1.95
TY1A-LR4P0C2I8 FUN30YAL019W 3396 nt2.89□□□□□ -1.95
TY1A-LR4P0C2I8 RPS28BYLR264W 204 nt2.89□□□□□ -1.95
TY1A-LR4P0C2I8 YNL114CYNL114C 372 nt2.89□□□□□ -1.95
TY1A-LR4P0C2I8 YOR161W-BYOR161W-B 261 nt2.89□□□□□ -1.95
TY1A-LR4P0C2I8 STU2YLR045C 2667 nt2.89□□□□□ -1.95
TY1A-LR4P0C2I8 MNL2YLR057W 2550 nt2.89□□□□□ -1.95
TY1A-LR4P0C2I8 ECM21YBL101C 3354 nt2.88□□□□□ -1.95
TY1A-LR4P0C2I8 AFI1YOR129C 2682 nt2.88□□□□□ -1.95
TY1A-LR4P0C2I8 RPH1YER169W 2391 nt2.88□□□□□ -1.95
TY1A-LR4P0C2I8 VPS16YPL045W 2397 nt2.88□□□□□ -1.95
TY1A-LR4P0C2I8 MCM10YIL150C 1716 nt2.88□□□□□ -1.95
TY1A-LR4P0C2I8 PSF1YDR013W 627 nt2.87□□□□□ -1.95
TY1A-LR4P0C2I8 RPL42BYHR141C 321 nt2.87□□□□□ -1.95
TY1A-LR4P0C2I8 RPL42AYNL162W 321 nt2.87□□□□□ -1.95
TY1A-LR4P0C2I8 ROM1YGR070W 3468 nt2.86□□□□□ -1.95
TY1A-LR4P0C2I8 FIR1YER032W 2631 nt2.86□□□□□ -1.95
TY1A-LR4P0C2I8 DYN2YDR424C 279 nt2.86□□□□□ -1.95
TY1A-LR4P0C2I8 ECM12YHR021W-A 456 nt2.86□□□□□ -1.95
TY1A-LR4P0C2I8 YMR105W-AYMR105W-A 195 nt2.86□□□□□ -1.95
TY1A-LR4P0C2I8 YBR178WYBR178W 375 nt2.86□□□□□ -1.95
TY1A-LR4P0C2I8 ARO1YDR127W 4767 nt2.86□□□□□ -1.95
TY1A-LR4P0C2I8 SNQ2YDR011W 4506 nt2.86□□□□□ -1.95
TY1A-LR4P0C2I8 SDC25YLL016W 3147 nt2.86□□□□□ -1.95
TY1A-LR4P0C2I8 RFX1YLR176C 2436 nt2.85□□□□□ -1.95
TY1A-LR4P0C2I8 RRP6YOR001W 2202 nt2.85□□□□□ -1.95
TY1A-LR4P0C2I8 STT4YLR305C 5703 nt2.85□□□□□ -1.95
TY1A-LR4P0C2I8 tR(ACG)JtR(ACG)J 73 nt2.85□□□□□ -1.95
TY1A-LR4P0C2I8 PFF1YBR074W 2931 nt2.85□□□□□ -1.95
TY1A-LR4P0C2I8 YDR003W-AYDR003W-A 123 nt2.84□□□□□ -1.95
TY1A-LR4P0C2I8 PHD1YKL043W 1101 nt2.84□□□□□ -1.95
TY1A-LR4P0C2I8 ELG1YOR144C 2376 nt2.84□□□□□ -1.95
TY1A-LR4P0C2I8 MMS22YLR320W 4365 nt2.84□□□□□ -1.96
TY1A-LR4P0C2I8 PDR12YPL058C 4536 nt2.83□□□□□ -1.96
TY1A-LR4P0C2I8 RGA2YDR379W 3030 nt2.83□□□□□ -1.96
TY1A-LR4P0C2I8 CLN3YAL040C 1743 nt2.83□□□□□ -1.96
TY1A-LR4P0C2I8 SNU13YEL026W 381 nt2.83□□□□□ -1.96
TY1A-LR4P0C2I8 YEL073CYEL073C 324 nt2.83□□□□□ -1.96
TY1A-LR4P0C2I8 SWI5YDR146C 2130 nt2.83□□□□□ -1.96
TY1A-LR4P0C2I8 YSP2YDR326C 4317 nt2.82□□□□□ -1.96
TY1A-LR4P0C2I8 RPL23BYER117W 414 nt2.82□□□□□ -1.96
TY1A-LR4P0C2I8 RPL20AYMR242C 519 nt2.82□□□□□ -1.96
TY1A-LR4P0C2I8 YBR277CYBR277C 402 nt2.82□□□□□ -1.96
TY1A-LR4P0C2I8 MET6YER091C 2304 nt2.82□□□□□ -1.96
TY1A-LR4P0C2I8 UBP14YBR058C 2346 nt2.82□□□□□ -1.96
TY1A-LR4P0C2I8 YGR067CYGR067C 2415 nt2.82□□□□□ -1.96
TY1A-LR4P0C2I8 MPT5YGL178W 2580 nt2.82□□□□□ -1.96
TY1A-LR4P0C2I8 ORC2YBR060C 1863 nt2.82□□□□□ -1.96
TY1A-LR4P0C2I8 ZRG8YER033C 3231 nt2.81□□□□□ -1.96
TY1A-LR4P0C2I8 INP53YOR109W 3324 nt2.81□□□□□ -1.96
TY1A-LR4P0C2I8 ACB1YGR037C 264 nt2.81□□□□□ -1.96
TY1A-LR4P0C2I8 SNC1YAL030W 354 nt2.81□□□□□ -1.96
TY1A-LR4P0C2I8 YLR154W-AYLR154W-A 186 nt2.81□□□□□ -1.96
TY1A-LR4P0C2I8 YLR364C-AYLR364C-A 123 nt2.81□□□□□ -1.96
TY1A-LR4P0C2I8 KIN2YLR096W 3444 nt2.8□□□□□ -1.96
TY1A-LR4P0C2I8 snR72snR72 98 nt2.8□□□□□ -1.96
TY1A-LR4P0C2I8 YHR073W-AYHR073W-A 177 nt2.8□□□□□ -1.96
TY1A-LR4P0C2I8 ECM15YBL001C 315 nt2.8□□□□□ -1.96
TY1A-LR4P0C2I8 KAP104YBR017C 2757 nt2.8□□□□□ -1.96
TY1A-LR4P0C2I8 SAF1YBR280C 1914 nt2.8□□□□□ -1.96
TY1A-LR4P0C2I8 EMP24YGL200C 612 nt2.79□□□□□ -1.96
TY1A-LR4P0C2I8 YHR032C-AYHR032C-A 120 nt2.79□□□□□ -1.96
TY1A-LR4P0C2I8 YBL012CYBL012C 402 nt2.79□□□□□ -1.96
TY1A-LR4P0C2I8 YOR072W-BYOR072W-B 162 nt2.79□□□□□ -1.96
TY1A-LR4P0C2I8 SLM1YIL105C 2061 nt2.79□□□□□ -1.96
TY1A-LR4P0C2I8 PTP3YER075C 2787 nt2.79□□□□□ -1.96
TY1A-LR4P0C2I8 SSN2YDR443C 4263 nt2.79□□□□□ -1.96
TY1A-LR4P0C2I8 CIN8YEL061C 3003 nt2.78□□□□□ -1.96
TY1A-LR4P0C2I8 IRR1YIL026C 3453 nt2.78□□□□□ -1.96
TY1A-LR4P0C2I8 YDR524C-AYDR524C-A 120 nt2.78□□□□□ -1.96
TY1A-LR4P0C2I8 HYP2YEL034W 474 nt2.78□□□□□ -1.96
TY1A-LR4P0C2I8 SLA1YBL007C 3735 nt2.78□□□□□ -1.96
TY1A-LR4P0C2I8 ATG13YPR185W 2217 nt2.78□□□□□ -1.96
TY1A-LR4P0C2I8 NIP100YPL174C 2607 nt2.77□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 60.1 ms