Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSF1P09603 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSF1P09603 AC011484.1-201ENST00000377652 1995 ntBASIC17.46■□□□□ 0.39
CSF1P09603 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CSF1P09603 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.46■□□□□ 0.38
CSF1P09603 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CSF1P09603 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.45■□□□□ 0.38
CSF1P09603 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.45■□□□□ 0.38
CSF1P09603 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CSF1P09603 YBX1P1-201ENST00000445822 960 ntBASIC17.45■□□□□ 0.38
CSF1P09603 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CSF1P09603 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.45■□□□□ 0.38
CSF1P09603 RARRES2P11-201ENST00000635158 484 ntBASIC17.45■□□□□ 0.38
CSF1P09603 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CSF1P09603 TNXA-203ENST00000507684 2038 ntBASIC17.45■□□□□ 0.38
CSF1P09603 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.45■□□□□ 0.38
CSF1P09603 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSF1P09603 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CSF1P09603 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.44■□□□□ 0.38
CSF1P09603 AP000974.1-201ENST00000623909 2387 ntBASIC17.44■□□□□ 0.38
CSF1P09603 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.44■□□□□ 0.38
CSF1P09603 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CSF1P09603 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.44■□□□□ 0.38
CSF1P09603 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.44■□□□□ 0.38
CSF1P09603 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.44■□□□□ 0.38
CSF1P09603 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CSF1P09603 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CSF1P09603 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.44■□□□□ 0.38
CSF1P09603 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CSF1P09603 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSF1P09603 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CSF1P09603 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CSF1P09603 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.43■□□□□ 0.38
CSF1P09603 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.43■□□□□ 0.38
CSF1P09603 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CSF1P09603 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.43■□□□□ 0.38
CSF1P09603 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
CSF1P09603 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.43■□□□□ 0.38
CSF1P09603 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CSF1P09603 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.43■□□□□ 0.38
CSF1P09603 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.43■□□□□ 0.38
CSF1P09603 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.43■□□□□ 0.38
CSF1P09603 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.43■□□□□ 0.38
CSF1P09603 AC022517.1-201ENST00000592429 346 ntBASIC17.43■□□□□ 0.38
CSF1P09603 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.43■□□□□ 0.38
CSF1P09603 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CSF1P09603 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.43■□□□□ 0.38
CSF1P09603 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 TSPY26P-201ENST00000476365 1326 ntBASIC17.43■□□□□ 0.38
CSF1P09603 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.43■□□□□ 0.38
CSF1P09603 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSF1P09603 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSF1P09603 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSF1P09603 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSF1P09603 BX005040.4-201ENST00000637145 1518 ntBASIC17.42■□□□□ 0.38
CSF1P09603 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CSF1P09603 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSF1P09603 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSF1P09603 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.42■□□□□ 0.38
CSF1P09603 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSF1P09603 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSF1P09603 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms