Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTSBP07858 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTSBP07858 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTSBP07858 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSBP07858 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTSBP07858 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTSBP07858 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSBP07858 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTSBP07858 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSBP07858 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSBP07858 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.26■□□□□ 0.67
CTSBP07858 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTSBP07858 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSBP07858 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSBP07858 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.26■□□□□ 0.67
CTSBP07858 CLDN5-201ENST00000403084 2357 ntBASIC19.26■□□□□ 0.67
CTSBP07858 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.26■□□□□ 0.67
CTSBP07858 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.25■□□□□ 0.67
CTSBP07858 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSBP07858 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSBP07858 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.25■□□□□ 0.67
CTSBP07858 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CTSBP07858 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CTSBP07858 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.25■□□□□ 0.67
CTSBP07858 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 RPS2P52-201ENST00000469610 820 ntBASIC19.25■□□□□ 0.67
CTSBP07858 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSBP07858 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.25■□□□□ 0.67
CTSBP07858 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSBP07858 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CTSBP07858 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSBP07858 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSBP07858 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CTSBP07858 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSBP07858 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSBP07858 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSBP07858 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSBP07858 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSBP07858 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.24■□□□□ 0.67
CTSBP07858 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSBP07858 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.24■□□□□ 0.67
CTSBP07858 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSBP07858 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSBP07858 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSBP07858 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSBP07858 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.24■□□□□ 0.67
CTSBP07858 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CTSBP07858 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSBP07858 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CTSBP07858 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.24■□□□□ 0.67
CTSBP07858 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSBP07858 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSBP07858 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSBP07858 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSBP07858 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTSBP07858 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTSBP07858 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSBP07858 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.23■□□□□ 0.67
CTSBP07858 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.23■□□□□ 0.67
CTSBP07858 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CTSBP07858 AC005829.2-201ENST00000571422 1056 ntBASIC19.23■□□□□ 0.67
CTSBP07858 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.23■□□□□ 0.67
CTSBP07858 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTSBP07858 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSBP07858 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.23■□□□□ 0.67
CTSBP07858 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.22■□□□□ 0.67
CTSBP07858 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSBP07858 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSBP07858 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CTSBP07858 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.22■□□□□ 0.67
CTSBP07858 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.22■□□□□ 0.67
CTSBP07858 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.22■□□□□ 0.67
CTSBP07858 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSBP07858 AC066615.1-201ENST00000640911 628 ntBASIC19.22■□□□□ 0.67
CTSBP07858 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms