Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.54■□□□□ 0.56
P04436 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04436 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P04436 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04436 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04436 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04436 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
P04436 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.53■□□□□ 0.56
P04436 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.53■□□□□ 0.56
P04436 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.53■□□□□ 0.56
P04436 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.53■□□□□ 0.56
P04436 AL390719.1-204ENST00000412397 1219 ntBASIC18.53■□□□□ 0.56
P04436 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
P04436 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.53■□□□□ 0.56
P04436 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.53■□□□□ 0.56
P04436 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
P04436 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.53■□□□□ 0.56
P04436 AC006058.3-201ENST00000606217 1069 ntBASIC18.53■□□□□ 0.56
P04436 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.53■□□□□ 0.56
P04436 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04436 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.52■□□□□ 0.56
P04436 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
P04436 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
P04436 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.52■□□□□ 0.56
P04436 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P04436 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
P04436 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
P04436 UNC93B4-201ENST00000505679 747 ntBASIC18.52■□□□□ 0.56
P04436 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
P04436 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P04436 SOX15-203ENST00000570788 1093 ntBASIC18.52■□□□□ 0.56
P04436 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.52■□□□□ 0.56
P04436 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
P04436 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
P04436 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
P04436 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
P04436 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04436 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P04436 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.51■□□□□ 0.55
P04436 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P04436 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
P04436 AC006128.1-201ENST00000624704 1661 ntBASIC18.51■□□□□ 0.55
P04436 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04436 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04436 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
P04436 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04436 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
P04436 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.51■□□□□ 0.55
P04436 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.51■□□□□ 0.55
P04436 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.51■□□□□ 0.55
P04436 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
P04436 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.51■□□□□ 0.55
P04436 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04436 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04436 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.51■□□□□ 0.55
P04436 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.51■□□□□ 0.55
P04436 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
P04436 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.51■□□□□ 0.55
P04436 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P04436 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04436 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
P04436 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04436 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
P04436 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P04436 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.5■□□□□ 0.55
P04436 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P04436 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.5■□□□□ 0.55
P04436 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P04436 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
P04436 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.5■□□□□ 0.55
P04436 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
P04436 KRT17P3-201ENST00000420566 1262 ntBASIC18.5■□□□□ 0.55
P04436 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
P04436 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.5■□□□□ 0.55
P04436 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
P04436 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P04436 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.5■□□□□ 0.55
P04436 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P04436 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.5■□□□□ 0.55
P04436 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P04436 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.5■□□□□ 0.55
P04436 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.5■□□□□ 0.55
P04436 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P04436 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.5■□□□□ 0.55
P04436 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04436 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04436 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
P04436 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms