Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 AC136469.2-201ENST00000623944 1028 ntBASIC17.5■□□□□ 0.39
HLA-DQB1P01920 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 AC020916.1-201ENST00000587762 1774 ntBASIC17.5■□□□□ 0.39
HLA-DQB1P01920 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 AC055733.4-201ENST00000638462 1354 ntBASIC17.5■□□□□ 0.39
HLA-DQB1P01920 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DQB1P01920 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.49■□□□□ 0.39
HLA-DQB1P01920 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 AC011298.3-201ENST00000615796 283 ntBASIC17.49■□□□□ 0.39
HLA-DQB1P01920 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB1P01920 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 AC007613.1-201ENST00000572811 2597 ntBASIC17.48■□□□□ 0.39
HLA-DQB1P01920 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB1P01920 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DQB1P01920 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms