Protein–RNA interactions for Protein: P00560

PGK1, Phosphoglycerate kinase, yeastyeast

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGK1P00560 NPR2YEL062W 1848 nt2.58□□□□□ -2
PGK1P00560 NPR1YNL183C 2373 nt2.57□□□□□ -2
PGK1P00560 SIP3YNL257C 3690 nt2.57□□□□□ -2
PGK1P00560 HSK3YKL138C-A 210 nt2.57□□□□□ -2
PGK1P00560 CCW14YLR390W-A 717 nt2.57□□□□□ -2
PGK1P00560 RPS18BYML026C 441 nt2.57□□□□□ -2
PGK1P00560 ACM1YPL267W 630 nt2.57□□□□□ -2
PGK1P00560 UTP14YML093W 2700 nt2.56□□□□□ -2
PGK1P00560 TFB1YDR311W 1929 nt2.56□□□□□ -2
PGK1P00560 FUS1YCL027W 1539 nt2.56□□□□□ -2
PGK1P00560 AIM9YER080W 1884 nt2.56□□□□□ -2
PGK1P00560 LEU3YLR451W 2661 nt2.55□□□□□ -2
PGK1P00560 YIL032CYIL032C 357 nt2.55□□□□□ -2
PGK1P00560 YIL102CYIL102C 306 nt2.55□□□□□ -2
PGK1P00560 BRO1YPL084W 2535 nt2.55□□□□□ -2
PGK1P00560 YPL182CYPL182C 384 nt2.55□□□□□ -2
PGK1P00560 RGR1YLR071C 3249 nt2.55□□□□□ -2
PGK1P00560 BOI1YBL085W 2943 nt2.54□□□□□ -2
PGK1P00560 YBL005W-BYBL005W-B 5268 nt2.54□□□□□ -2
PGK1P00560 RPS17BYDR447C 411 nt2.54□□□□□ -2
PGK1P00560 YMR324CYMR324C 243 nt2.54□□□□□ -2
PGK1P00560 YOR008C-AYOR008C-A 225 nt2.54□□□□□ -2
PGK1P00560 YBR121C-AYBR121C-A 159 nt2.54□□□□□ -2
PGK1P00560 MLH1YMR167W 2310 nt2.54□□□□□ -2
PGK1P00560 TIM13YGR181W 318 nt2.53□□□□□ -2
PGK1P00560 SAP190YKR028W 3102 nt2.53□□□□□ -2
PGK1P00560 COG3YER157W 2406 nt2.52□□□□□ -2.01
PGK1P00560 YOR302WYOR302W 78 nt2.52□□□□□ -2.01
PGK1P00560 GEA1YJR031C 4227 nt2.52□□□□□ -2.01
PGK1P00560 VPS13YLL040C 9435 nt2.52□□□□□ -2.01
PGK1P00560 ISW1YBR245C 3390 nt2.52□□□□□ -2.01
PGK1P00560 SSE1YPL106C 2082 nt2.51□□□□□ -2.01
PGK1P00560 SIR3YLR442C 2937 nt2.51□□□□□ -2.01
PGK1P00560 YDL185C-AYDL185C-A 228 nt2.51□□□□□ -2.01
PGK1P00560 YER121WYER121W 345 nt2.51□□□□□ -2.01
PGK1P00560 YGL239CYGL239C 315 nt2.51□□□□□ -2.01
PGK1P00560 KTI11YBL071W-A 249 nt2.51□□□□□ -2.01
PGK1P00560 YOR170WYOR170W 306 nt2.51□□□□□ -2.01
PGK1P00560 TRM7YBR061C 933 nt2.51□□□□□ -2.01
PGK1P00560 SAK1YER129W 3429 nt2.51□□□□□ -2.01
PGK1P00560 SPF1YEL031W 3648 nt2.5□□□□□ -2.01
PGK1P00560 SOK2YMR016C 2358 nt2.5□□□□□ -2.01
PGK1P00560 COG8YML071C 1824 nt2.5□□□□□ -2.01
PGK1P00560 snR55snR55 98 nt2.5□□□□□ -2.01
PGK1P00560 Q0143Q0143 153 nt2.5□□□□□ -2.01
PGK1P00560 YLR154W-EYLR154W-E 204 nt2.5□□□□□ -2.01
PGK1P00560 SAR1YPL218W 573 nt2.5□□□□□ -2.01
PGK1P00560 SVL3YPL032C 2478 nt2.5□□□□□ -2.01
PGK1P00560 YIL166CYIL166C 1629 nt2.5□□□□□ -2.01
PGK1P00560 INP53YOR109W 3324 nt2.49□□□□□ -2.01
PGK1P00560 MVP1YMR004W 1536 nt2.49□□□□□ -2.01
PGK1P00560 LSO2YGR169C-A 279 nt2.49□□□□□ -2.01
PGK1P00560 YHL041WYHL041W 450 nt2.49□□□□□ -2.01
PGK1P00560 YHL042WYHL042W 453 nt2.49□□□□□ -2.01
PGK1P00560 PHS1YJL097W 654 nt2.49□□□□□ -2.01
PGK1P00560 RPL25YOL127W 429 nt2.49□□□□□ -2.01
PGK1P00560 YBT1YLL048C 4986 nt2.49□□□□□ -2.01
PGK1P00560 BNR1YIL159W 4128 nt2.49□□□□□ -2.01
PGK1P00560 YEF3YLR249W 3135 nt2.48□□□□□ -2.01
PGK1P00560 PUT3YKL015W 2940 nt2.48□□□□□ -2.01
PGK1P00560 TRS65YGR166W 1683 nt2.48□□□□□ -2.01
PGK1P00560 YMR31YFR049W 372 nt2.48□□□□□ -2.01
PGK1P00560 RPL40AYIL148W 387 nt2.48□□□□□ -2.01
PGK1P00560 YJL150WYJL150W 303 nt2.48□□□□□ -2.01
PGK1P00560 RPL36AYMR194W 303 nt2.48□□□□□ -2.01
PGK1P00560 TOR1YJR066W 7413 nt2.48□□□□□ -2.01
PGK1P00560 RIM20YOR275C 1986 nt2.48□□□□□ -2.01
PGK1P00560 ATG11YPR049C 3537 nt2.47□□□□□ -2.01
PGK1P00560 QCR7YDR529C 384 nt2.47□□□□□ -2.01
PGK1P00560 GPG1YGL121C 381 nt2.47□□□□□ -2.01
PGK1P00560 ATP7YKL016C 525 nt2.47□□□□□ -2.01
PGK1P00560 MRPL33YMR286W 261 nt2.47□□□□□ -2.01
PGK1P00560 YNL170WYNL170W 396 nt2.47□□□□□ -2.01
PGK1P00560 INO80YGL150C 4470 nt2.47□□□□□ -2.01
PGK1P00560 snR60snR60 104 nt2.46□□□□□ -2.02
PGK1P00560 TIM11YDR322C-A 291 nt2.46□□□□□ -2.02
PGK1P00560 DNL4YOR005C 2835 nt2.46□□□□□ -2.02
PGK1P00560 UBP1YDL122W 2430 nt2.46□□□□□ -2.02
PGK1P00560 ECM25YJL201W 1800 nt2.45□□□□□ -2.02
PGK1P00560 PHO2YDL106C 1680 nt2.45□□□□□ -2.02
PGK1P00560 PAU2YEL049W 363 nt2.45□□□□□ -2.02
PGK1P00560 YER088C-AYER088C-A 324 nt2.45□□□□□ -2.02
PGK1P00560 YBR197CYBR197C 654 nt2.45□□□□□ -2.02
PGK1P00560 SSN2YDR443C 4263 nt2.45□□□□□ -2.02
PGK1P00560 ASG1YIL130W 2895 nt2.45□□□□□ -2.02
PGK1P00560 YKU80YMR106C 1890 nt2.45□□□□□ -2.02
PGK1P00560 SMY2YBR172C 2223 nt2.45□□□□□ -2.02
PGK1P00560 SPB1YCL054W 2526 nt2.44□□□□□ -2.02
PGK1P00560 TRA1YHR099W 11235 nt2.44□□□□□ -2.02
PGK1P00560 YOL057WYOL057W 2136 nt2.44□□□□□ -2.02
PGK1P00560 YLR053CYLR053C 327 nt2.44□□□□□ -2.02
PGK1P00560 CLN3YAL040C 1743 nt2.44□□□□□ -2.02
PGK1P00560 APC2YLR127C 2562 nt2.44□□□□□ -2.02
PGK1P00560 SSQ1YLR369W 1974 nt2.43□□□□□ -2.02
PGK1P00560 UTP22YGR090W 3714 nt2.43□□□□□ -2.02
PGK1P00560 YGL052WYGL052W 306 nt2.43□□□□□ -2.02
PGK1P00560 RAM2YKL019W 951 nt2.43□□□□□ -2.02
PGK1P00560 LCL2YLR104W 396 nt2.43□□□□□ -2.02
PGK1P00560 YMR172C-AYMR172C-A 384 nt2.43□□□□□ -2.02
PGK1P00560 PSO2YMR137C 1986 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 19.3 ms