Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PGK1P00558 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.69■■□□□ 1.22
PGK1P00558 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
PGK1P00558 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PGK1P00558 AC242852.2-201ENST00000615738 1807 ntBASIC22.68■■□□□ 1.22
PGK1P00558 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PGK1P00558 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.68■■□□□ 1.22
PGK1P00558 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PGK1P00558 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PGK1P00558 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.68■■□□□ 1.22
PGK1P00558 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PGK1P00558 FAM197Y1-201ENST00000421178 764 ntBASIC22.68■■□□□ 1.22
PGK1P00558 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.68■■□□□ 1.22
PGK1P00558 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.68■■□□□ 1.22
PGK1P00558 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.68■■□□□ 1.22
PGK1P00558 AL121829.2-201ENST00000620908 328 ntBASIC22.68■■□□□ 1.22
PGK1P00558 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.68■■□□□ 1.22
PGK1P00558 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PGK1P00558 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PGK1P00558 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.68■■□□□ 1.22
PGK1P00558 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PGK1P00558 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PGK1P00558 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGK1P00558 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGK1P00558 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGK1P00558 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.67■■□□□ 1.22
PGK1P00558 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.67■■□□□ 1.22
PGK1P00558 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGK1P00558 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGK1P00558 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGK1P00558 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.67■■□□□ 1.22
PGK1P00558 KRT16P5-201ENST00000455284 522 ntBASIC22.67■■□□□ 1.22
PGK1P00558 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGK1P00558 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.67■■□□□ 1.22
PGK1P00558 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.67■■□□□ 1.22
PGK1P00558 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.67■■□□□ 1.22
PGK1P00558 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PGK1P00558 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGK1P00558 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGK1P00558 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PGK1P00558 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PGK1P00558 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PGK1P00558 NBPF21P-201ENST00000425093 1451 ntBASIC22.66■■□□□ 1.22
PGK1P00558 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PGK1P00558 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PGK1P00558 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PGK1P00558 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PGK1P00558 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PGK1P00558 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PGK1P00558 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PGK1P00558 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PGK1P00558 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PGK1P00558 KRT18P35-201ENST00000510488 1269 ntBASIC22.66■■□□□ 1.22
PGK1P00558 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.66■■□□□ 1.22
PGK1P00558 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
PGK1P00558 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.66■■□□□ 1.22
PGK1P00558 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.66■■□□□ 1.22
PGK1P00558 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PGK1P00558 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.66■■□□□ 1.22
PGK1P00558 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
PGK1P00558 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PGK1P00558 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.66■■□□□ 1.22
PGK1P00558 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PGK1P00558 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PGK1P00558 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PGK1P00558 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.65■■□□□ 1.22
PGK1P00558 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PGK1P00558 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.65■■□□□ 1.22
PGK1P00558 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.65■■□□□ 1.22
PGK1P00558 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PGK1P00558 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.65■■□□□ 1.22
PGK1P00558 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.65■■□□□ 1.22
PGK1P00558 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.65■■□□□ 1.22
PGK1P00558 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.65■■□□□ 1.22
PGK1P00558 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.65■■□□□ 1.22
PGK1P00558 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.65■■□□□ 1.22
PGK1P00558 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.65■■□□□ 1.22
PGK1P00558 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.65■■□□□ 1.22
PGK1P00558 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PGK1P00558 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PGK1P00558 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PGK1P00558 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PGK1P00558 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PGK1P00558 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PGK1P00558 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.64■■□□□ 1.22
PGK1P00558 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
PGK1P00558 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PGK1P00558 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.64■■□□□ 1.21
PGK1P00558 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PGK1P00558 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PGK1P00558 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.64■■□□□ 1.21
PGK1P00558 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PGK1P00558 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PGK1P00558 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PGK1P00558 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.64■■□□□ 1.21
PGK1P00558 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PGK1P00558 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.64■■□□□ 1.21
PGK1P00558 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PGK1P00558 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PGK1P00558 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 613.1 ms