Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 AL162430.1-201ENST00000480705 870 ntBASIC20.36■□□□□ 0.85
VAPBO95292 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 MIR5787-201ENST00000611784 55 ntBASIC20.36■□□□□ 0.85
VAPBO95292 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.36■□□□□ 0.85
VAPBO95292 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.36■□□□□ 0.85
VAPBO95292 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.36■□□□□ 0.85
VAPBO95292 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.36■□□□□ 0.85
VAPBO95292 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
VAPBO95292 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
VAPBO95292 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.35■□□□□ 0.85
VAPBO95292 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 AC016405.3-201ENST00000607710 860 ntBASIC20.35■□□□□ 0.85
VAPBO95292 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
VAPBO95292 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.35■□□□□ 0.85
VAPBO95292 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
VAPBO95292 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPBO95292 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
VAPBO95292 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VAPBO95292 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.34■□□□□ 0.85
VAPBO95292 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
VAPBO95292 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAPBO95292 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.34■□□□□ 0.85
VAPBO95292 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
VAPBO95292 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAPBO95292 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
VAPBO95292 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
VAPBO95292 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VAPBO95292 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.34■□□□□ 0.85
VAPBO95292 AC006015.1-201ENST00000429970 570 ntBASIC20.34■□□□□ 0.85
VAPBO95292 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.34■□□□□ 0.85
VAPBO95292 AC007322.4-201ENST00000509611 723 ntBASIC20.34■□□□□ 0.85
VAPBO95292 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.34■□□□□ 0.85
VAPBO95292 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.34■□□□□ 0.85
VAPBO95292 AC011767.1-201ENST00000617410 1153 ntBASIC20.34■□□□□ 0.85
VAPBO95292 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
VAPBO95292 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VAPBO95292 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAPBO95292 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VAPBO95292 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
VAPBO95292 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAPBO95292 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAPBO95292 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.33■□□□□ 0.85
VAPBO95292 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.33■□□□□ 0.85
VAPBO95292 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.33■□□□□ 0.85
VAPBO95292 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
VAPBO95292 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.33■□□□□ 0.85
VAPBO95292 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.33■□□□□ 0.85
VAPBO95292 DUX4L16-201ENST00000555130 1264 ntBASIC20.33■□□□□ 0.85
VAPBO95292 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.33■□□□□ 0.85
VAPBO95292 AL162412.1-201ENST00000567129 965 ntBASIC20.33■□□□□ 0.85
VAPBO95292 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.33■□□□□ 0.85
VAPBO95292 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VAPBO95292 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
VAPBO95292 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.33■□□□□ 0.84
VAPBO95292 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VAPBO95292 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
VAPBO95292 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
VAPBO95292 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VAPBO95292 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.33■□□□□ 0.84
VAPBO95292 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VAPBO95292 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.32■□□□□ 0.84
VAPBO95292 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.32■□□□□ 0.84
VAPBO95292 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 CNN2P6-201ENST00000439038 900 ntBASIC20.32■□□□□ 0.84
VAPBO95292 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.32■□□□□ 0.84
VAPBO95292 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.32■□□□□ 0.84
VAPBO95292 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPBO95292 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.32■□□□□ 0.84
VAPBO95292 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms