Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KDM4BO94953 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KDM4BO94953 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.74■□□□□ 0.43
KDM4BO94953 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.74■□□□□ 0.43
KDM4BO94953 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDM4BO94953 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.73■□□□□ 0.43
KDM4BO94953 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.73■□□□□ 0.43
KDM4BO94953 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.73■□□□□ 0.43
KDM4BO94953 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 AC142381.2-201ENST00000566120 298 ntBASIC17.73■□□□□ 0.43
KDM4BO94953 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDM4BO94953 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.73■□□□□ 0.43
KDM4BO94953 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.72■□□□□ 0.43
KDM4BO94953 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.72■□□□□ 0.43
KDM4BO94953 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KDM4BO94953 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.72■□□□□ 0.43
KDM4BO94953 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
KDM4BO94953 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
KDM4BO94953 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.72■□□□□ 0.43
KDM4BO94953 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.72■□□□□ 0.43
KDM4BO94953 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.72■□□□□ 0.43
KDM4BO94953 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.72■□□□□ 0.43
KDM4BO94953 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KDM4BO94953 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KDM4BO94953 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KDM4BO94953 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDM4BO94953 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDM4BO94953 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.71■□□□□ 0.43
KDM4BO94953 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
KDM4BO94953 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.71■□□□□ 0.43
KDM4BO94953 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.71■□□□□ 0.43
KDM4BO94953 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KDM4BO94953 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.71■□□□□ 0.43
KDM4BO94953 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.71■□□□□ 0.43
KDM4BO94953 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KDM4BO94953 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDM4BO94953 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.71■□□□□ 0.43
KDM4BO94953 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDM4BO94953 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDM4BO94953 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDM4BO94953 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KDM4BO94953 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KDM4BO94953 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
KDM4BO94953 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
KDM4BO94953 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.71■□□□□ 0.42
KDM4BO94953 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
KDM4BO94953 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
KDM4BO94953 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
KDM4BO94953 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
KDM4BO94953 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KDM4BO94953 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDM4BO94953 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDM4BO94953 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KDM4BO94953 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDM4BO94953 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.7■□□□□ 0.42
KDM4BO94953 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KDM4BO94953 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KDM4BO94953 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KDM4BO94953 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KDM4BO94953 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDM4BO94953 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDM4BO94953 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDM4BO94953 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.7■□□□□ 0.42
KDM4BO94953 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KDM4BO94953 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KDM4BO94953 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KDM4BO94953 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms