Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RPP40O75818 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.8■□□□□ 0.92
RPP40O75818 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RPP40O75818 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 KRT18P68-201ENST00000392293 1000 ntBASIC20.8■□□□□ 0.92
RPP40O75818 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.8■□□□□ 0.92
RPP40O75818 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.8■□□□□ 0.92
RPP40O75818 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
RPP40O75818 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.8■□□□□ 0.92
RPP40O75818 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.8■□□□□ 0.92
RPP40O75818 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.8■□□□□ 0.92
RPP40O75818 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RPP40O75818 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPP40O75818 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
RPP40O75818 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPP40O75818 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RPP40O75818 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPP40O75818 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPP40O75818 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPP40O75818 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
RPP40O75818 AC010331.1-201ENST00000611423 582 ntBASIC20.79■□□□□ 0.92
RPP40O75818 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPP40O75818 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
RPP40O75818 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.79■□□□□ 0.92
RPP40O75818 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPP40O75818 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPP40O75818 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP40O75818 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP40O75818 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.78■□□□□ 0.92
RPP40O75818 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPP40O75818 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RPP40O75818 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP40O75818 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP40O75818 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.78■□□□□ 0.92
RPP40O75818 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPP40O75818 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPP40O75818 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.78■□□□□ 0.92
RPP40O75818 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.78■□□□□ 0.92
RPP40O75818 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.78■□□□□ 0.92
RPP40O75818 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
RPP40O75818 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RPP40O75818 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP40O75818 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP40O75818 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP40O75818 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RPP40O75818 AC121338.2-201ENST00000622535 1744 ntBASIC20.78■□□□□ 0.92
RPP40O75818 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.78■□□□□ 0.92
RPP40O75818 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPP40O75818 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RPP40O75818 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPP40O75818 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.77■□□□□ 0.92
RPP40O75818 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPP40O75818 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.77■□□□□ 0.92
RPP40O75818 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPP40O75818 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
RPP40O75818 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPP40O75818 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.77■□□□□ 0.92
RPP40O75818 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPP40O75818 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.77■□□□□ 0.92
RPP40O75818 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPP40O75818 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.77■□□□□ 0.92
RPP40O75818 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RPP40O75818 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.77■□□□□ 0.92
RPP40O75818 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPP40O75818 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.77■□□□□ 0.92
RPP40O75818 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPP40O75818 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.77■□□□□ 0.92
RPP40O75818 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.77■□□□□ 0.91
RPP40O75818 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
RPP40O75818 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.77■□□□□ 0.91
RPP40O75818 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RPP40O75818 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPP40O75818 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPP40O75818 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.76■□□□□ 0.91
RPP40O75818 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.76■□□□□ 0.91
RPP40O75818 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPP40O75818 PLK5-205ENST00000642079 1969 ntBASIC20.76■□□□□ 0.91
RPP40O75818 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPP40O75818 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.76■□□□□ 0.91
RPP40O75818 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.76■□□□□ 0.91
RPP40O75818 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RPP40O75818 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPP40O75818 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
RPP40O75818 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPP40O75818 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RPP40O75818 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.75■□□□□ 0.91
RPP40O75818 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms