Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.05■□□□□ 0.8
KLHL41O60662 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KLHL41O60662 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.05■□□□□ 0.8
KLHL41O60662 HLA-L-209ENST00000420110 1011 ntBASIC20.05■□□□□ 0.8
KLHL41O60662 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.05■□□□□ 0.8
KLHL41O60662 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.05■□□□□ 0.8
KLHL41O60662 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.05■□□□□ 0.8
KLHL41O60662 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.05■□□□□ 0.8
KLHL41O60662 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KLHL41O60662 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KLHL41O60662 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL41O60662 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
KLHL41O60662 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
KLHL41O60662 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL41O60662 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
KLHL41O60662 CDCA4P2-201ENST00000441182 718 ntBASIC20.04■□□□□ 0.8
KLHL41O60662 AC006970.2-201ENST00000450065 779 ntBASIC20.04■□□□□ 0.8
KLHL41O60662 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.04■□□□□ 0.8
KLHL41O60662 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.04■□□□□ 0.8
KLHL41O60662 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.04■□□□□ 0.8
KLHL41O60662 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL41O60662 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.04■□□□□ 0.8
KLHL41O60662 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KLHL41O60662 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL41O60662 AC055733.4-201ENST00000638462 1354 ntBASIC20.04■□□□□ 0.8
KLHL41O60662 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.04■□□□□ 0.8
KLHL41O60662 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
KLHL41O60662 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.04■□□□□ 0.8
KLHL41O60662 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL41O60662 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL41O60662 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
KLHL41O60662 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KLHL41O60662 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL41O60662 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.03■□□□□ 0.8
KLHL41O60662 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL41O60662 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KLHL41O60662 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KLHL41O60662 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL41O60662 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KLHL41O60662 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
KLHL41O60662 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL41O60662 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL41O60662 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL41O60662 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.03■□□□□ 0.8
KLHL41O60662 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL41O60662 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL41O60662 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.03■□□□□ 0.8
KLHL41O60662 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL41O60662 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL41O60662 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL41O60662 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KLHL41O60662 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.02■□□□□ 0.8
KLHL41O60662 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL41O60662 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.02■□□□□ 0.8
KLHL41O60662 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.02■□□□□ 0.8
KLHL41O60662 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL41O60662 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KLHL41O60662 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL41O60662 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
KLHL41O60662 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
KLHL41O60662 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KLHL41O60662 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
KLHL41O60662 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL41O60662 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.01■□□□□ 0.79
KLHL41O60662 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.01■□□□□ 0.79
KLHL41O60662 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.01■□□□□ 0.79
KLHL41O60662 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL41O60662 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL41O60662 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL41O60662 RAP2CP1-201ENST00000605103 478 ntBASIC20.01■□□□□ 0.79
KLHL41O60662 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
KLHL41O60662 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL41O60662 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KLHL41O60662 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL41O60662 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL41O60662 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
KLHL41O60662 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL41O60662 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20■□□□□ 0.79
KLHL41O60662 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KLHL41O60662 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KLHL41O60662 KRT87P-202ENST00000534226 1464 ntBASIC20■□□□□ 0.79
KLHL41O60662 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KLHL41O60662 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20■□□□□ 0.79
KLHL41O60662 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KLHL41O60662 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20■□□□□ 0.79
KLHL41O60662 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20■□□□□ 0.79
KLHL41O60662 AC011767.1-201ENST00000617410 1153 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms