Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SLC28A2O43868 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SLC28A2O43868 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC28A2O43868 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC28A2O43868 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC28A2O43868 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SLC28A2O43868 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC28A2O43868 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC28A2O43868 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.48■□□□□ 0.71
SLC28A2O43868 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.48■□□□□ 0.71
SLC28A2O43868 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.48■□□□□ 0.71
SLC28A2O43868 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.48■□□□□ 0.71
SLC28A2O43868 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.48■□□□□ 0.71
SLC28A2O43868 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC28A2O43868 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC28A2O43868 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.48■□□□□ 0.71
SLC28A2O43868 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC28A2O43868 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC28A2O43868 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
SLC28A2O43868 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC28A2O43868 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC28A2O43868 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC28A2O43868 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SLC28A2O43868 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC28A2O43868 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SLC28A2O43868 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC28A2O43868 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SLC28A2O43868 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 SNORA78-201ENST00000459373 127 ntBASIC19.47■□□□□ 0.71
SLC28A2O43868 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SLC28A2O43868 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.47■□□□□ 0.71
SLC28A2O43868 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.47■□□□□ 0.71
SLC28A2O43868 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC28A2O43868 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC28A2O43868 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC28A2O43868 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SLC28A2O43868 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC28A2O43868 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC28A2O43868 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC28A2O43868 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC28A2O43868 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SLC28A2O43868 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SLC28A2O43868 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC28A2O43868 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SLC28A2O43868 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC28A2O43868 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SLC28A2O43868 AC007322.4-201ENST00000509611 723 ntBASIC19.45■□□□□ 0.7
SLC28A2O43868 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC28A2O43868 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.45■□□□□ 0.7
SLC28A2O43868 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.45■□□□□ 0.7
SLC28A2O43868 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC28A2O43868 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC28A2O43868 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 AC006128.1-201ENST00000624704 1661 ntBASIC19.45■□□□□ 0.7
SLC28A2O43868 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC28A2O43868 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A2O43868 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A2O43868 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC28A2O43868 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC28A2O43868 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC28A2O43868 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC28A2O43868 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A2O43868 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SLC28A2O43868 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms