Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAFD1O14545 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAFD1O14545 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAFD1O14545 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
TRAFD1O14545 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAFD1O14545 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAFD1O14545 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAFD1O14545 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAFD1O14545 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAFD1O14545 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
TRAFD1O14545 AC100791.3-201ENST00000617619 330 ntBASIC20.75■□□□□ 0.91
TRAFD1O14545 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAFD1O14545 AC010980.2-201ENST00000587099 1412 ntBASIC20.75■□□□□ 0.91
TRAFD1O14545 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRAFD1O14545 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAFD1O14545 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAFD1O14545 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRAFD1O14545 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TRAFD1O14545 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.74■□□□□ 0.91
TRAFD1O14545 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TRAFD1O14545 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.74■□□□□ 0.91
TRAFD1O14545 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRAFD1O14545 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAFD1O14545 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.74■□□□□ 0.91
TRAFD1O14545 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAFD1O14545 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAFD1O14545 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TRAFD1O14545 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAFD1O14545 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAFD1O14545 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAFD1O14545 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TRAFD1O14545 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRAFD1O14545 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAFD1O14545 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAFD1O14545 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAFD1O14545 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAFD1O14545 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAFD1O14545 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
TRAFD1O14545 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAFD1O14545 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAFD1O14545 AC121338.2-201ENST00000622535 1744 ntBASIC20.73■□□□□ 0.91
TRAFD1O14545 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAFD1O14545 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAFD1O14545 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAFD1O14545 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAFD1O14545 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRAFD1O14545 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.72■□□□□ 0.91
TRAFD1O14545 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAFD1O14545 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAFD1O14545 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAFD1O14545 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.72■□□□□ 0.91
TRAFD1O14545 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAFD1O14545 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TRAFD1O14545 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAFD1O14545 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAFD1O14545 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAFD1O14545 MKRN4P-201ENST00000444706 1521 ntBASIC20.72■□□□□ 0.91
TRAFD1O14545 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAFD1O14545 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRAFD1O14545 PLK5-205ENST00000642079 1969 ntBASIC20.72■□□□□ 0.91
TRAFD1O14545 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAFD1O14545 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAFD1O14545 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAFD1O14545 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAFD1O14545 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAFD1O14545 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TRAFD1O14545 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
TRAFD1O14545 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAFD1O14545 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAFD1O14545 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAFD1O14545 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
TRAFD1O14545 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.71■□□□□ 0.91
TRAFD1O14545 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
TRAFD1O14545 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAFD1O14545 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRAFD1O14545 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAFD1O14545 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAFD1O14545 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAFD1O14545 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.71■□□□□ 0.91
TRAFD1O14545 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAFD1O14545 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRAFD1O14545 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
TRAFD1O14545 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAFD1O14545 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAFD1O14545 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAFD1O14545 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAFD1O14545 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.7■□□□□ 0.9
TRAFD1O14545 AC142086.2-201ENST00000569753 217 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms