Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 AP001330.3-201ENST00000520123 633 ntBASIC18.72■□□□□ 0.59
TNFRSF11BO00300 TPRG1LP1-201ENST00000598702 760 ntBASIC18.72■□□□□ 0.59
TNFRSF11BO00300 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 AC018445.3-201ENST00000624177 1945 ntBASIC18.72■□□□□ 0.59
TNFRSF11BO00300 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 RASA4CP-201ENST00000424092 1398 ntBASIC18.71■□□□□ 0.59
TNFRSF11BO00300 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 AC120498.10-201ENST00000621827 505 ntBASIC18.71■□□□□ 0.59
TNFRSF11BO00300 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TNFRSF11BO00300 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
TNFRSF11BO00300 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 AC079140.4-201ENST00000507448 529 ntBASIC18.7■□□□□ 0.58
TNFRSF11BO00300 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 KRT87P-202ENST00000534226 1464 ntBASIC18.7■□□□□ 0.58
TNFRSF11BO00300 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.7■□□□□ 0.58
TNFRSF11BO00300 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 EDA-201ENST00000338901 1233 ntBASIC18.69■□□□□ 0.58
TNFRSF11BO00300 AC096631.2-201ENST00000436136 790 ntBASIC18.69■□□□□ 0.58
TNFRSF11BO00300 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF11BO00300 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 AIRN-201ENST00000601203 4374 ntBASIC18.68■□□□□ 0.58
TNFRSF11BO00300 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 BX323043.1-201ENST00000641006 1765 ntBASIC18.68■□□□□ 0.58
TNFRSF11BO00300 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.68■□□□□ 0.58
TNFRSF11BO00300 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 AC138907.5-202ENST00000569484 235 ntBASIC18.68■□□□□ 0.58
TNFRSF11BO00300 AC106739.1-201ENST00000617035 715 ntBASIC18.68■□□□□ 0.58
TNFRSF11BO00300 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF11BO00300 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms