Protein–RNA interactions for Protein: O00233

PSMD9, 26S proteasome non-ATPase regulatory subunit 9, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9O00233 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PSMD9O00233 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD9O00233 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.05■□□□□ 0.48
PSMD9O00233 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
PSMD9O00233 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.05■□□□□ 0.48
PSMD9O00233 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PSMD9O00233 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PSMD9O00233 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.05■□□□□ 0.48
PSMD9O00233 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.05■□□□□ 0.48
PSMD9O00233 AC245052.3-201ENST00000450182 901 ntBASIC18.05■□□□□ 0.48
PSMD9O00233 AC105265.2-201ENST00000467189 838 ntBASIC18.05■□□□□ 0.48
PSMD9O00233 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.05■□□□□ 0.48
PSMD9O00233 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PSMD9O00233 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD9O00233 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
PSMD9O00233 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.05■□□□□ 0.48
PSMD9O00233 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD9O00233 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD9O00233 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.05■□□□□ 0.48
PSMD9O00233 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.05■□□□□ 0.48
PSMD9O00233 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
PSMD9O00233 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PSMD9O00233 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD9O00233 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PSMD9O00233 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PSMD9O00233 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 IRS3P-201ENST00000223076 1006 ntBASIC18.04■□□□□ 0.48
PSMD9O00233 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 SLC7A5P2-201ENST00000553010 536 ntBASIC18.04■□□□□ 0.48
PSMD9O00233 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PSMD9O00233 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PSMD9O00233 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PSMD9O00233 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMD9O00233 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMD9O00233 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMD9O00233 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PSMD9O00233 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.03■□□□□ 0.48
PSMD9O00233 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMD9O00233 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMD9O00233 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PSMD9O00233 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMD9O00233 AC104187.1-201ENST00000607510 612 ntBASIC18.03■□□□□ 0.48
PSMD9O00233 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.03■□□□□ 0.48
PSMD9O00233 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMD9O00233 KRT16P2-201ENST00000414673 1423 ntBASIC18.03■□□□□ 0.48
PSMD9O00233 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PSMD9O00233 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.03■□□□□ 0.48
PSMD9O00233 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 HCG11-201ENST00000411553 5696 ntBASIC18.02■□□□□ 0.48
PSMD9O00233 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.02■□□□□ 0.48
PSMD9O00233 AC005837.3-201ENST00000612163 286 ntBASIC18.02■□□□□ 0.48
PSMD9O00233 AC120498.10-201ENST00000621827 505 ntBASIC18.02■□□□□ 0.48
PSMD9O00233 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PSMD9O00233 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PSMD9O00233 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PSMD9O00233 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
PSMD9O00233 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PSMD9O00233 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PSMD9O00233 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PSMD9O00233 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PSMD9O00233 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PSMD9O00233 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PSMD9O00233 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.01■□□□□ 0.47
PSMD9O00233 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.01■□□□□ 0.47
PSMD9O00233 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PSMD9O00233 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PSMD9O00233 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PSMD9O00233 AC010141.2-201ENST00000452426 721 ntBASIC18.01■□□□□ 0.47
PSMD9O00233 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PSMD9O00233 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PSMD9O00233 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.01■□□□□ 0.47
PSMD9O00233 AC116050.2-201ENST00000612102 1779 ntBASIC18.01■□□□□ 0.47
PSMD9O00233 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PSMD9O00233 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms