Protein–RNA interactions for Protein: O00231

PSMD11, 26S proteasome non-ATPase regulatory subunit 11, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11O00231 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD11O00231 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD11O00231 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.25■□□□□ 0.83
PSMD11O00231 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD11O00231 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.25■□□□□ 0.83
PSMD11O00231 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.25■□□□□ 0.83
PSMD11O00231 AC060766.5-201ENST00000590539 871 ntBASIC20.25■□□□□ 0.83
PSMD11O00231 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD11O00231 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD11O00231 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD11O00231 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD11O00231 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD11O00231 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD11O00231 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
PSMD11O00231 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PSMD11O00231 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PSMD11O00231 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PSMD11O00231 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
PSMD11O00231 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD11O00231 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD11O00231 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD11O00231 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PSMD11O00231 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD11O00231 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.24■□□□□ 0.83
PSMD11O00231 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.24■□□□□ 0.83
PSMD11O00231 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PSMD11O00231 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.24■□□□□ 0.83
PSMD11O00231 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD11O00231 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD11O00231 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD11O00231 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
PSMD11O00231 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.24■□□□□ 0.83
PSMD11O00231 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PSMD11O00231 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PSMD11O00231 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
PSMD11O00231 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PSMD11O00231 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.23■□□□□ 0.83
PSMD11O00231 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.23■□□□□ 0.83
PSMD11O00231 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.23■□□□□ 0.83
PSMD11O00231 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.23■□□□□ 0.83
PSMD11O00231 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.23■□□□□ 0.83
PSMD11O00231 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PSMD11O00231 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.23■□□□□ 0.83
PSMD11O00231 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD11O00231 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD11O00231 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.22■□□□□ 0.83
PSMD11O00231 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD11O00231 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PSMD11O00231 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.22■□□□□ 0.83
PSMD11O00231 RNA5SP413-201ENST00000516373 109 ntBASIC20.22■□□□□ 0.83
PSMD11O00231 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.22■□□□□ 0.83
PSMD11O00231 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PSMD11O00231 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.22■□□□□ 0.83
PSMD11O00231 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD11O00231 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD11O00231 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD11O00231 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PSMD11O00231 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.22■□□□□ 0.83
PSMD11O00231 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.21■□□□□ 0.83
PSMD11O00231 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.21■□□□□ 0.83
PSMD11O00231 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PSMD11O00231 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.21■□□□□ 0.83
PSMD11O00231 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 AC007225.1-201ENST00000566331 1836 ntBASIC20.21■□□□□ 0.83
PSMD11O00231 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.21■□□□□ 0.83
PSMD11O00231 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.21■□□□□ 0.83
PSMD11O00231 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.21■□□□□ 0.83
PSMD11O00231 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.21■□□□□ 0.83
PSMD11O00231 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD11O00231 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.21■□□□□ 0.83
PSMD11O00231 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSMD11O00231 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PSMD11O00231 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSMD11O00231 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSMD11O00231 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.2■□□□□ 0.82
PSMD11O00231 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.2■□□□□ 0.82
PSMD11O00231 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms