Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC188H7C350 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 BX119927.1-201ENST00000636596 1552 ntBASIC21.06■□□□□ 0.96
CCDC188H7C350 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 DPP3P2-201ENST00000416030 1696 ntBASIC21.05■□□□□ 0.96
CCDC188H7C350 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC188H7C350 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC188H7C350 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC188H7C350 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC188H7C350 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC188H7C350 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC188H7C350 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC188H7C350 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC188H7C350 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC188H7C350 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC188H7C350 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC188H7C350 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC188H7C350 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC188H7C350 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC188H7C350 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CCDC188H7C350 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC188H7C350 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CCDC188H7C350 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC188H7C350 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC188H7C350 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC188H7C350 AC005332.7-201ENST00000614046 2005 ntBASIC21.04■□□□□ 0.96
CCDC188H7C350 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC188H7C350 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC188H7C350 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC188H7C350 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC188H7C350 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.04■□□□□ 0.96
CCDC188H7C350 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC188H7C350 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC188H7C350 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC188H7C350 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC188H7C350 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC188H7C350 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC188H7C350 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC188H7C350 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC188H7C350 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC188H7C350 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC188H7C350 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
CCDC188H7C350 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC188H7C350 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC188H7C350 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC188H7C350 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC188H7C350 PBX2P1-201ENST00000493219 1291 ntBASIC21.03■□□□□ 0.96
CCDC188H7C350 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 AC106739.1-201ENST00000617035 715 ntBASIC21.03■□□□□ 0.96
CCDC188H7C350 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC188H7C350 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC188H7C350 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC188H7C350 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC188H7C350 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC188H7C350 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC188H7C350 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCDC188H7C350 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC188H7C350 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC188H7C350 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC188H7C350 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
CCDC188H7C350 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC188H7C350 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC188H7C350 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC188H7C350 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCDC188H7C350 AC010141.2-201ENST00000452426 721 ntBASIC21.02■□□□□ 0.96
CCDC188H7C350 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCDC188H7C350 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC188H7C350 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC188H7C350 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC188H7C350 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC188H7C350 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.95
CCDC188H7C350 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CCDC188H7C350 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC188H7C350 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC188H7C350 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC188H7C350 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC188H7C350 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC188H7C350 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC188H7C350 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC188H7C350 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC188H7C350 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC188H7C350 MIR939-201ENST00000401314 82 ntBASIC21.01■□□□□ 0.95
CCDC188H7C350 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms