Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCP4L1A6NKN8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 AC125437.2-201ENST00000625180 2167 ntBASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCP4L1A6NKN8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 PCDHA12-202ENST00000613593 2588 ntBASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCP4L1A6NKN8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC15.96■□□□□ 0.14
PCP4L1A6NKN8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCP4L1A6NKN8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCP4L1A6NKN8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCP4L1A6NKN8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCP4L1A6NKN8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCP4L1A6NKN8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 PLK5-205ENST00000642079 1969 ntBASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCP4L1A6NKN8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCP4L1A6NKN8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms