Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 AC069236.1-201ENST00000604339 616 ntBASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC162PA2VCL2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 PGM5P4-201ENST00000421970 445 ntBASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 AC100791.3-201ENST00000617619 330 ntBASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 AC008694.1-202ENST00000636953 945 ntBASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC162PA2VCL2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.27■□□□□ 0.83
CCDC162PA2VCL2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CCDC162PA2VCL2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CCDC162PA2VCL2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC162PA2VCL2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 MCRIP2P1-201ENST00000394346 511 ntBASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC162PA2VCL2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 RAP2CP1-201ENST00000605103 478 ntBASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 OR10C1-204ENST00000622521 1039 ntBASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 SMG8-203ENST00000578922 2178 ntBASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC162PA2VCL2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC162PA2VCL2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms