Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RASA4CP-201ENST00000424092 1398 ntBASIC21.84■■□□□ 1.09
CCDC66A2RUB6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 TNXA-203ENST00000507684 2038 ntBASIC21.84■■□□□ 1.09
CCDC66A2RUB6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 AL355001.2-201ENST00000620617 1191 ntBASIC21.83■■□□□ 1.09
CCDC66A2RUB6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC66A2RUB6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.83■■□□□ 1.08
CCDC66A2RUB6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC66A2RUB6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC66A2RUB6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 AC073314.1-201ENST00000568729 2216 ntBASIC21.82■■□□□ 1.08
CCDC66A2RUB6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 AC004408.2-201ENST00000623613 2777 ntBASIC21.82■■□□□ 1.08
CCDC66A2RUB6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC66A2RUB6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 MIR939-201ENST00000401314 82 ntBASIC21.81■■□□□ 1.08
CCDC66A2RUB6 EEF1DP3-203ENST00000566025 782 ntBASIC21.81■■□□□ 1.08
CCDC66A2RUB6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 AC053503.5-201ENST00000601508 636 ntBASIC21.81■■□□□ 1.08
CCDC66A2RUB6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC66A2RUB6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 AC091305.1-201ENST00000479476 895 ntBASIC21.8■■□□□ 1.08
CCDC66A2RUB6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 AC110285.6-201ENST00000617652 491 ntBASIC21.8■■□□□ 1.08
CCDC66A2RUB6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC66A2RUB6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC66A2RUB6 AC012414.1-201ENST00000556676 535 ntBASIC21.79■■□□□ 1.08
CCDC66A2RUB6 AF213884.3-201ENST00000563833 479 ntBASIC21.79■■□□□ 1.08
CCDC66A2RUB6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms