Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 AC091799.1-201ENST00000422823 811 ntBASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 DUX4L2-201ENST00000561772 1275 ntBASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 AC131212.1-201ENST00000613771 668 ntBASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 AC110285.6-201ENST00000617652 491 ntBASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 MIR6084-201ENST00000622012 110 ntBASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 DUX4L6-201ENST00000626483 1275 ntBASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 DUX4L1-201ENST00000627662 1275 ntBASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 DUX4L8-201ENST00000629013 1275 ntBASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 DUX4L3-201ENST00000630187 1275 ntBASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 DUX4L7-201ENST00000630678 1275 ntBASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 DUX4L5-201ENST00000630834 1275 ntBASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.58■□□□□ 0.41
TRBV5-5A0A0J9YX44 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.41
TRBV5-5A0A0J9YX44 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRBV5-5A0A0J9YX44 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV5-5A0A0J9YX44 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-5A0A0J9YX44 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV5-5A0A0J9YX44 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-5A0A0J9YX44 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV5-5A0A0J9YX44 AC008406.3-201ENST00000620001 1374 ntBASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 AC243732.1-201ENST00000612648 864 ntBASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 AC005332.7-201ENST00000614046 2005 ntBASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 TREX1-205ENST00000625293 1783 ntBASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-5A0A0J9YX44 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRBV5-5A0A0J9YX44 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 AC007322.3-201ENST00000426526 701 ntBASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 SUDS3P1-201ENST00000505831 966 ntBASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRBV5-5A0A0J9YX44 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV5-5A0A0J9YX44 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV5-5A0A0J9YX44 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV5-5A0A0J9YX44 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.55■□□□□ 0.4
TRBV5-5A0A0J9YX44 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-5A0A0J9YX44 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.55■□□□□ 0.4
TRBV5-5A0A0J9YX44 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.55■□□□□ 0.4
TRBV5-5A0A0J9YX44 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-5A0A0J9YX44 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV5-5A0A0J9YX44 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms