Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRBV5-4A0A0C4DH59 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRBV5-4A0A0C4DH59 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRBV5-4A0A0C4DH59 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRBV5-4A0A0C4DH59 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 AC073210.2-201ENST00000430369 194 ntBASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 MIR4758-201ENST00000577688 71 ntBASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV5-4A0A0C4DH59 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 SMG8-203ENST00000578922 2178 ntBASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 PPP1R14BP2-201ENST00000426284 444 ntBASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 AC091874.3-201ENST00000512672 1195 ntBASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 AL138781.1-201ENST00000566567 1274 ntBASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-4A0A0C4DH59 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 HLA-L-209ENST00000420110 1011 ntBASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 DUSP5P2-201ENST00000426873 1033 ntBASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 MYC-209ENST00000641252 345 ntBASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.99■□□□□ 0.79
TRBV5-4A0A0C4DH59 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 ID1-201ENST00000376105 1233 ntBASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 AC098934.4-201ENST00000564127 592 ntBASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-4A0A0C4DH59 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms