Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV2A0A0B4J234 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV2A0A0B4J234 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV2A0A0B4J234 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV2A0A0B4J234 KRT8P36-201ENST00000489121 1440 ntBASIC15.3■□□□□ 0.04
TRAV2A0A0B4J234 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAV2A0A0B4J234 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV2A0A0B4J234 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV2A0A0B4J234 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV2A0A0B4J234 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV2A0A0B4J234 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
TRAV2A0A0B4J234 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 AL356652.1-201ENST00000615962 565 ntBASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TRAV2A0A0B4J234 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 CYP2T3P-201ENST00000601990 817 ntBASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV2A0A0B4J234 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 AC073130.3-201ENST00000624389 2278 ntBASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 MIR663A-201ENST00000385250 93 ntBASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 KRT18P68-201ENST00000392293 1000 ntBASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 AC006970.2-201ENST00000450065 779 ntBASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 AF201337.1-201ENST00000520239 748 ntBASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 AL589743.5-201ENST00000616611 1050 ntBASIC15.27■□□□□ 0.04
TRAV2A0A0B4J234 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV2A0A0B4J234 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV2A0A0B4J234 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV2A0A0B4J234 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV2A0A0B4J234 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV2A0A0B4J234 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TRAV2A0A0B4J234 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV2A0A0B4J234 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV2A0A0B4J234 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV2A0A0B4J234 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV2A0A0B4J234 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 AC010980.2-201ENST00000587099 1412 ntBASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms