Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 AL596275.1-201ENST00000423464 877 ntBASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV19A0A0A6YYK7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV19A0A0A6YYK7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TRAV19A0A0A6YYK7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
TRAV19A0A0A6YYK7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TRAV19A0A0A6YYK7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRAV19A0A0A6YYK7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 FEM1AP4-201ENST00000443167 1987 ntBASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 AC239809.2-201ENST00000415381 517 ntBASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 AC023632.3-201ENST00000521633 145 ntBASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 AL023875.1-201ENST00000640777 796 ntBASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV19A0A0A6YYK7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms