Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 AC006213.4-201ENST00000616184 634 ntBASIC8.8□□□□□ -1
SYCE2Q6PIF2 C18orf12-201ENST00000623329 537 ntBASIC8.8□□□□□ -1
SYCE2Q6PIF2 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 HERC2P8-202ENST00000564334 3705 ntBASIC8.8□□□□□ -1
SYCE2Q6PIF2 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 COG2-201ENST00000366668 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 ZNF710-AS1-202ENST00000620791 2133 ntBASIC8.8□□□□□ -1
SYCE2Q6PIF2 AL022334.1-201ENST00000417397 1726 ntBASIC8.8□□□□□ -1
SYCE2Q6PIF2 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 RN7SKP257-201ENST00000364525 309 ntBASIC8.79□□□□□ -1
SYCE2Q6PIF2 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 SNORD86-201ENST00000391196 86 ntBASIC8.79□□□□□ -1
SYCE2Q6PIF2 MSRB1P1-201ENST00000396851 354 ntBASIC8.79□□□□□ -1
SYCE2Q6PIF2 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AP001342.1-201ENST00000423389 525 ntBASIC8.79□□□□□ -1
SYCE2Q6PIF2 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC092634.4-203ENST00000451395 448 ntBASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC069213.3-201ENST00000454858 474 ntBASIC8.79□□□□□ -1
SYCE2Q6PIF2 CREM-234ENST00000484283 660 ntTSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC078962.3-201ENST00000545821 482 ntTSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 RN7SL785P-201ENST00000578437 253 ntBASIC8.79□□□□□ -1
SYCE2Q6PIF2 LINC00662-207ENST00000590677 883 ntTSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC002401.3-201ENST00000620020 440 ntBASIC8.79□□□□□ -1
SYCE2Q6PIF2 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 PACRG-203ENST00000366889 1503 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 AC007848.1-201ENST00000538430 1405 ntTSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 LINC01725-205ENST00000457273 1991 ntTSL 2 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
SYCE2Q6PIF2 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SYCE2Q6PIF2 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYCE2Q6PIF2 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYCE2Q6PIF2 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 NDE1-201ENST00000396354 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SYCE2Q6PIF2 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC8.78□□□□□ -1
SYCE2Q6PIF2 RN7SKP93-201ENST00000363838 309 ntBASIC8.78□□□□□ -1
SYCE2Q6PIF2 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC8.78□□□□□ -1
SYCE2Q6PIF2 MED28P1-201ENST00000399158 571 ntBASIC8.78□□□□□ -1
SYCE2Q6PIF2 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 SNORD3J-201ENST00000408473 190 ntBASIC8.78□□□□□ -1
SYCE2Q6PIF2 RNA5SP231-201ENST00000410496 138 ntBASIC8.78□□□□□ -1
SYCE2Q6PIF2 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 LINC00423-201ENST00000421002 903 ntTSL 5 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 HBBP1-201ENST00000433329 439 ntBASIC8.78□□□□□ -1
SYCE2Q6PIF2 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC8.78□□□□□ -1
SYCE2Q6PIF2 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms