RNA–Protein interactions for RNA: ENST00000590677.5

LINC00662-207, long intergenic non-protein coding RNA 662, humanhuman

TSL 5 BASIC

Gene LINC00662, Length 883 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-207ENST00000590677 AEBP2Q6ZN18 517 aaPredicted RBP29.56■■■□□ 2.32
LINC00662-207ENST00000590677 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
LINC00662-207ENST00000590677 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
LINC00662-207ENST00000590677 SENP3Q9H4L4 574 aaPredicted RBP25.03■■□□□ 1.6
LINC00662-207ENST00000590677 PLPPR3Q6T4P5 718 aa23.41■■□□□ 1.34
LINC00662-207ENST00000590677 FOXD1Q16676 465 aa23.24■■□□□ 1.31
LINC00662-207ENST00000590677 PPP6R1Q9UPN7 881 aa22.4■■□□□ 1.18
LINC00662-207ENST00000590677 ADRA2BP18089 450 aa22.33■■□□□ 1.17
LINC00662-207ENST00000590677 PIAS4Q8N2W9 510 aaPredicted RBP21.86■■□□□ 1.09
LINC00662-207ENST00000590677 MSH5O43196 834 aa21.41■■□□□ 1.02
LINC00662-207ENST00000590677 PPP4R3CPQ6ZMV5 832 aa20.63■□□□□ 0.89
LINC00662-207ENST00000590677 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
LINC00662-207ENST00000590677 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
LINC00662-207ENST00000590677 KCNA4P22459 653 aa20.17■□□□□ 0.82
LINC00662-207ENST00000590677 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
LINC00662-207ENST00000590677 CNKSR2Q8WXI2 1034 aa20.06■□□□□ 0.8
LINC00662-207ENST00000590677 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
LINC00662-207ENST00000590677 NPM3O75607 178 aaKnown RBP19.82■□□□□ 0.76
LINC00662-207ENST00000590677 RNF216Q9NWF9 866 aaPredicted RBP19.69■□□□□ 0.74
LINC00662-207ENST00000590677 HOXD11P31277 338 aaPredicted RBP19.64■□□□□ 0.73
LINC00662-207ENST00000590677 NISCHQ9Y2I1 1504 aa19.53■□□□□ 0.72
LINC00662-207ENST00000590677 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
LINC00662-207ENST00000590677 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
LINC00662-207ENST00000590677 SLC4A1APQ9BWU0 796 aaKnown RBP19.18■□□□□ 0.66
LINC00662-207ENST00000590677 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
LINC00662-207ENST00000590677 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
LINC00662-207ENST00000590677 ZBTB22O15209 634 aa18.61■□□□□ 0.57
LINC00662-207ENST00000590677 EHMT2Q96KQ7 1210 aa18.59■□□□□ 0.57
LINC00662-207ENST00000590677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.56
LINC00662-207ENST00000590677 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
LINC00662-207ENST00000590677 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
LINC00662-207ENST00000590677 RNF39Q9H2S5 420 aa18.39■□□□□ 0.53
LINC00662-207ENST00000590677 U3KPZ7 1027 aaPredicted RBP18.38■□□□□ 0.53
LINC00662-207ENST00000590677 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
LINC00662-207ENST00000590677 C1QBPQ07021 282 aaKnown RBP18.15■□□□□ 0.5
LINC00662-207ENST00000590677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.11■□□□□ 0.49
LINC00662-207ENST00000590677 HNRNPUL2Q1KMD3 747 aaKnown RBP18.11■□□□□ 0.49
LINC00662-207ENST00000590677 SAMD1Q6SPF0 538 aaPredicted RBP18.05■□□□□ 0.48
LINC00662-207ENST00000590677 ATXN8OSP0DMR3 200 aa17.96■□□□□ 0.47
LINC00662-207ENST00000590677 APLP2Q06481 763 aa17.89■□□□□ 0.45
LINC00662-207ENST00000590677 ABCC9O60706 1549 aa17.84■□□□□ 0.45
LINC00662-207ENST00000590677 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
LINC00662-207ENST00000590677 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
LINC00662-207ENST00000590677 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
LINC00662-207ENST00000590677 CAPN15O75808 1086 aa17.68■□□□□ 0.42
LINC00662-207ENST00000590677 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
LINC00662-207ENST00000590677 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
LINC00662-207ENST00000590677 CCDC180Q9P1Z9 1646 aa17.57■□□□□ 0.4
LINC00662-207ENST00000590677 DSG3P32926 999 aa17.49■□□□□ 0.39
LINC00662-207ENST00000590677 POLA2Q14181 598 aa17.36■□□□□ 0.37
LINC00662-207ENST00000590677 ABCB7O75027 752 aa17.35■□□□□ 0.37
LINC00662-207ENST00000590677 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
LINC00662-207ENST00000590677 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.32
LINC00662-207ENST00000590677 FBLN2P98095 1184 aa17■□□□□ 0.31
LINC00662-207ENST00000590677 RB1CC1Q8TDY2 1594 aa16.85■□□□□ 0.29
LINC00662-207ENST00000590677 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
LINC00662-207ENST00000590677 NACADO15069 1562 aa16.69■□□□□ 0.26
LINC00662-207ENST00000590677 SPDYE2BA6NHP3 402 aa16.66■□□□□ 0.26
LINC00662-207ENST00000590677 SPDYE6P0CI01 402 aa16.66■□□□□ 0.26
LINC00662-207ENST00000590677 SPDYE2Q495Y8 402 aa16.66■□□□□ 0.26
LINC00662-207ENST00000590677 SPDYE4A6NLX3 237 aa16.63■□□□□ 0.25
LINC00662-207ENST00000590677 FKBP8Q14318 412 aa16.63■□□□□ 0.25
LINC00662-207ENST00000590677 RBM42Q9BTD8 480 aaKnown RBP16.62■□□□□ 0.25
LINC00662-207ENST00000590677 DCAF8L2P0C7V8 631 aa16.6■□□□□ 0.25
LINC00662-207ENST00000590677 SSUH2Q9Y2M2 353 aa16.59■□□□□ 0.25
LINC00662-207ENST00000590677 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
LINC00662-207ENST00000590677 ZNF692Q9BU19 519 aaPredicted RBP16.54■□□□□ 0.24
LINC00662-207ENST00000590677 PROM2Q8N271 834 aa16.5■□□□□ 0.23
LINC00662-207ENST00000590677 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
LINC00662-207ENST00000590677 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
LINC00662-207ENST00000590677 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
LINC00662-207ENST00000590677 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
LINC00662-207ENST00000590677 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
LINC00662-207ENST00000590677 ZCCHC6Q5VYS8 1495 aaKnown RBP16.16■□□□□ 0.18
LINC00662-207ENST00000590677 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
LINC00662-207ENST00000590677 SPDYE1Q8NFV5 336 aaPredicted RBP16.14■□□□□ 0.17
LINC00662-207ENST00000590677 DCAF1Q9Y4B6 1507 aa16.11■□□□□ 0.17
LINC00662-207ENST00000590677 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
LINC00662-207ENST00000590677 PITPNM1O00562 1244 aa16.09■□□□□ 0.17
LINC00662-207ENST00000590677 STAG3Q9UJ98 1225 aa16.09■□□□□ 0.17
LINC00662-207ENST00000590677 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
LINC00662-207ENST00000590677 FBXO3Q9UK99 471 aa16.06■□□□□ 0.16
LINC00662-207ENST00000590677 SCRIBQ14160 1630 aa16.04■□□□□ 0.16
LINC00662-207ENST00000590677 EIF4G1Q04637 1599 aaKnown RBP16■□□□□ 0.15
LINC00662-207ENST00000590677 CLEC11AQ9Y240 323 aa15.97■□□□□ 0.15
LINC00662-207ENST00000590677 CHRDL2Q6WN34 429 aa15.92■□□□□ 0.14
LINC00662-207ENST00000590677 PRR29P0C7W0 189 aa15.89■□□□□ 0.13
LINC00662-207ENST00000590677 VASPP50552 380 aaPredicted RBP15.86■□□□□ 0.13
LINC00662-207ENST00000590677 FXR2P51116 673 aaKnown RBP eCLIP15.83■□□□□ 0.12
LINC00662-207ENST00000590677 CREBZFQ9NS37 354 aa15.77■□□□□ 0.12
LINC00662-207ENST00000590677 PIP4P2Q8N4L2 257 aa15.74■□□□□ 0.11
LINC00662-207ENST00000590677 MIER1Q8N108 512 aa15.72■□□□□ 0.11
LINC00662-207ENST00000590677 DNAJC5Q9H3Z4 198 aa15.69■□□□□ 0.1
LINC00662-207ENST00000590677 PLCD3Q8N3E9 789 aa15.68■□□□□ 0.1
LINC00662-207ENST00000590677 IFNLR1Q8IU57 520 aaPredicted RBP15.67■□□□□ 0.1
LINC00662-207ENST00000590677 MNX1P50219 401 aaPredicted RBP15.66■□□□□ 0.1
LINC00662-207ENST00000590677 PRKAR2AP13861 404 aaKnown RBP15.64■□□□□ 0.09
LINC00662-207ENST00000590677 CHADLQ6NUI6 762 aa15.64■□□□□ 0.09
LINC00662-207ENST00000590677 PLEKHG5O94827 1062 aa15.6■□□□□ 0.09
LINC00662-207ENST00000590677 ZBTB47Q9UFB7 747 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms