Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 CEACAM5-201ENST00000221992 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 TBC1D3P1-DHX40P1-201ENST00000587125 1841 ntTSL 2 BASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 AC092375.2-201ENST00000567370 1665 ntBASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 AC009021.2-201ENST00000567401 1666 ntBASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 ZNF322-202ENST00000456172 4718 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 ZNF322-207ENST00000607204 4737 ntAPPRIS P1 TSL 4 BASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 GLULP5-201ENST00000547831 1390 ntBASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 AC024896.1-201ENST00000500632 2549 ntTSL 5 BASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 AOAH-211ENST00000617537 2381 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SYCE2Q6PIF2 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC8.84□□□□□ -1
SYCE2Q6PIF2 EIF4BP2-201ENST00000416702 1794 ntBASIC8.84□□□□□ -1
SYCE2Q6PIF2 DDX11L16-201ENST00000507418 1306 ntBASIC8.83□□□□□ -1
SYCE2Q6PIF2 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 RETNLB-201ENST00000295755 676 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 RN7SKP173-201ENST00000362821 315 ntBASIC8.83□□□□□ -1
SYCE2Q6PIF2 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 RBM22P7-201ENST00000421321 280 ntBASIC8.83□□□□□ -1
SYCE2Q6PIF2 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 RPS27P12-201ENST00000464146 258 ntBASIC8.83□□□□□ -1
SYCE2Q6PIF2 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 PPP1R1AP1-201ENST00000525622 425 ntBASIC8.83□□□□□ -1
SYCE2Q6PIF2 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 LACRT-203ENST00000547511 504 ntAPPRIS ALT2 TSL 3 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 OTOA-202ENST00000388956 3466 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 SGK1-201ENST00000237305 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 AL353588.1-201ENST00000505802 3513 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
SYCE2Q6PIF2 MAGOHB-201ENST00000320756 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYCE2Q6PIF2 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 GAB3-202ENST00000369575 4718 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 XRCC6P1-201ENST00000420392 1805 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 STAU2-AS1-201ENST00000517604 2076 ntTSL 2 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 ATG4A-203ENST00000372232 2315 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 PLS3-AS1-202ENST00000607680 1763 ntTSL 2 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 ITGB3BP-202ENST00000371092 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 AC109638.1-201ENST00000417406 326 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 RPL3P4-201ENST00000417615 423 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 AC015977.2-201ENST00000420852 567 ntTSL 3 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 AC130472.1-201ENST00000427885 309 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 AC019185.3-201ENST00000438805 323 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 AL929410.2-201ENST00000451170 189 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 PYM1-204ENST00000454792 884 ntTSL 2 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 C2orf74-205ENST00000488469 1070 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 CASP1P2-201ENST00000526830 1258 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 MIR744-201ENST00000578242 98 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 AC010719.1-201ENST00000602992 747 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 AC016876.3-201ENST00000610459 426 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 AC040978.1-201ENST00000617244 1282 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 AC245028.3-201ENST00000618197 285 ntBASIC8.82□□□□□ -1
SYCE2Q6PIF2 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 AP003086.1-201ENST00000513207 1642 ntTSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms