Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 MAPK12-209ENST00000497036 6248 ntTSL 214.22□□□□□ -0.131e-7■■□□□ 13.4
PRPF8Q6P2Q9 EXOC3-208ENST00000511015 1031 ntTSL 215.41■□□□□ 0.063e-10■■□□□ 13.4
PRPF8Q6P2Q9 CCND1-205ENST00000542367 476 ntTSL 1 (best)14.01□□□□□ -0.173e-17■■□□□ 13.4
PRPF8Q6P2Q9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.75■■□□□ 1.391e-12■■□□□ 13.4
PRPF8Q6P2Q9 JTB-206ENST00000471173 754 ntTSL 318.54■□□□□ 0.566e-11■■□□□ 13.4
PRPF8Q6P2Q9 FLCN-207ENST00000466317 2684 ntTSL 210.82□□□□□ -0.689e-17■■□□□ 13.4
PRPF8Q6P2Q9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.63□□□□□ -2.153e-7■■□□□ 13.4
PRPF8Q6P2Q9 FBXO18-204ENST00000460453 634 ntTSL 28.92□□□□□ -0.981e-8■■□□□ 13.4
PRPF8Q6P2Q9 CAPNS1-208ENST00000589162 701 ntTSL 34.8□□□□□ -1.642e-7■■□□□ 13.4
PRPF8Q6P2Q9 CWF19L2-203ENST00000462890 550 ntTSL 32.33□□□□□ -2.042e-7■■□□□ 13.4
PRPF8Q6P2Q9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.081e-6■■□□□ 13.4
PRPF8Q6P2Q9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.32■□□□□ 0.841e-6■■□□□ 13.4
PRPF8Q6P2Q9 HIP1R-206ENST00000536772 538 ntTSL 211.72□□□□□ -0.532e-6■■□□□ 13.4
PRPF8Q6P2Q9 CDK10-212ENST00000510811 1376 ntTSL 215.52■□□□□ 0.089e-9■■□□□ 13.4
PRPF8Q6P2Q9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.46■□□□□ 0.069e-9■■□□□ 13.4
PRPF8Q6P2Q9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.119e-9■■□□□ 13.4
PRPF8Q6P2Q9 CDK10-209ENST00000505733 1703 ntTSL 214.3□□□□□ -0.129e-9■■□□□ 13.4
PRPF8Q6P2Q9 CDK10-204ENST00000472018 2532 ntTSL 211.74□□□□□ -0.539e-9■■□□□ 13.4
PRPF8Q6P2Q9 CDK10-217ENST00000564192 897 ntTSL 510.84□□□□□ -0.679e-9■■□□□ 13.4
PRPF8Q6P2Q9 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC9.21□□□□□ -0.939e-9■■□□□ 13.4
PRPF8Q6P2Q9 CDK10-201ENST00000331006 3344 ntTSL 2 BASIC8.39□□□□□ -1.079e-9■■□□□ 13.4
PRPF8Q6P2Q9 ACSL3-207ENST00000474422 760 ntTSL 37.28□□□□□ -1.243e-17■■□□□ 13.4
PRPF8Q6P2Q9 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC10.06□□□□□ -0.84e-7■■□□□ 13.4
PRPF8Q6P2Q9 EXTL2-202ENST00000370114 3985 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.974e-7■■□□□ 13.4
PRPF8Q6P2Q9 EXTL2-206ENST00000494907 440 ntTSL 35.21□□□□□ -1.584e-7■■□□□ 13.4
PRPF8Q6P2Q9 EXTL2-204ENST00000450240 902 ntTSL 44.72□□□□□ -1.654e-7■■□□□ 13.4
PRPF8Q6P2Q9 EXTL2-203ENST00000416479 730 ntTSL 22.75□□□□□ -1.974e-7■■□□□ 13.4
PRPF8Q6P2Q9 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.044e-7■■□□□ 13.4
PRPF8Q6P2Q9 EXTL2-205ENST00000480774 678 ntTSL 20.07□□□□□ -2.44e-7■■□□□ 13.4
PRPF8Q6P2Q9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.518e-7■■□□□ 13.4
PRPF8Q6P2Q9 RCOR1-204ENST00000560472 411 ntTSL 33.54□□□□□ -1.842e-6■■□□□ 13.4
PRPF8Q6P2Q9 RAB11FIP4-207ENST00000581460 617 ntTSL 416.73■□□□□ 0.271e-8■■□□□ 13.4
PRPF8Q6P2Q9 BSCL2-211ENST00000448568 992 ntAPPRIS ALT2 TSL 318.16■□□□□ 0.51e-7■■□□□ 13.4
PRPF8Q6P2Q9 KCTD20-205ENST00000460983 597 ntTSL 415.97■□□□□ 0.154e-7■■□□□ 13.4
PRPF8Q6P2Q9 KCTD20-209ENST00000498267 547 ntTSL 415.97■□□□□ 0.154e-7■■□□□ 13.4
PRPF8Q6P2Q9 KCTD20-208ENST00000483557 578 ntTSL 47.6□□□□□ -1.194e-7■■□□□ 13.4
PRPF8Q6P2Q9 GALE-210ENST00000467493 987 ntTSL 513.78□□□□□ -0.21e-7■■□□□ 13.4
PRPF8Q6P2Q9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.66□□□□□ -0.386e-9■■□□□ 13.4
PRPF8Q6P2Q9 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.486e-9■■□□□ 13.4
PRPF8Q6P2Q9 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.536e-9■■□□□ 13.4
PRPF8Q6P2Q9 NBEAL2-208ENST00000475689 677 ntTSL 216.22■□□□□ 0.193e-8■■□□□ 13.4
PRPF8Q6P2Q9 LRP4-205ENST00000534404 663 ntTSL 527.91■■■□□ 2.063e-6■■□□□ 13.4
PRPF8Q6P2Q9 NPIPA1-206ENST00000541836 2747 ntTSL 510.03□□□□□ -0.89e-8■■□□□ 13.4
PRPF8Q6P2Q9 CSNK2A1-210ENST00000619801 655 ntTSL 37.16□□□□□ -1.264e-7■■□□□ 13.4
PRPF8Q6P2Q9 MAN2C1-225ENST00000565699 556 ntTSL 311.13□□□□□ -0.631e-21■■□□□ 13.4
PRPF8Q6P2Q9 CDKN1A-205ENST00000459970 604 ntTSL 515.57■□□□□ 0.081e-9■■□□□ 13.4
PRPF8Q6P2Q9 FDPS-205ENST00000465559 677 ntTSL 313.18□□□□□ -0.33e-10■■□□□ 13.4
PRPF8Q6P2Q9 FDPS-212ENST00000487002 2017 ntTSL 212.9□□□□□ -0.343e-10■■□□□ 13.4
PRPF8Q6P2Q9 ENTPD6-214ENST00000463734 639 ntTSL 211.74□□□□□ -0.531e-9■■□□□ 13.4
PRPF8Q6P2Q9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.12□□□□□ -0.474e-7■■□□□ 13.4
PRPF8Q6P2Q9 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.564e-7■■□□□ 13.4
PRPF8Q6P2Q9 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.35□□□□□ -0.754e-7■■□□□ 13.4
PRPF8Q6P2Q9 KYAT1-207ENST00000462722 2089 ntTSL 1 (best)10.17□□□□□ -0.784e-7■■□□□ 13.4
PRPF8Q6P2Q9 BCL7A-202ENST00000432926 871 ntTSL 220.06■□□□□ 0.81e-6■■□□□ 13.4
PRPF8Q6P2Q9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.11e-6■■□□□ 13.4
PRPF8Q6P2Q9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.29■□□□□ 0.043e-7■■□□□ 13.4
PRPF8Q6P2Q9 SHKBP1-223ENST00000600552 566 ntTSL 415.25■□□□□ 0.033e-7■■□□□ 13.4
PRPF8Q6P2Q9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.37□□□□□ -0.111e-6■■□□□ 13.4
PRPF8Q6P2Q9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.153e-7■■□□□ 13.4
PRPF8Q6P2Q9 SHKBP1-224ENST00000600718 1993 ntTSL 513.95□□□□□ -0.183e-7■■□□□ 13.4
PRPF8Q6P2Q9 SHKBP1-219ENST00000599575 810 ntTSL 513.74□□□□□ -0.213e-7■■□□□ 13.4
PRPF8Q6P2Q9 SHKBP1-205ENST00000594973 2339 ntTSL 213.22□□□□□ -0.293e-7■■□□□ 13.4
PRPF8Q6P2Q9 SHKBP1-211ENST00000595945 823 ntTSL 312.17□□□□□ -0.463e-7■■□□□ 13.4
PRPF8Q6P2Q9 SHKBP1-217ENST00000598558 579 ntTSL 311.75□□□□□ -0.533e-7■■□□□ 13.4
PRPF8Q6P2Q9 SHKBP1-207ENST00000595631 552 ntTSL 411.62□□□□□ -0.553e-7■■□□□ 13.4
PRPF8Q6P2Q9 SHKBP1-209ENST00000595803 773 ntTSL 510.52□□□□□ -0.733e-7■■□□□ 13.4
PRPF8Q6P2Q9 SHKBP1-206ENST00000595523 575 ntTSL 49.49□□□□□ -0.893e-7■■□□□ 13.4
PRPF8Q6P2Q9 SELENOI-204ENST00000462301 424 ntTSL 1 (best)10.83□□□□□ -0.689e-11■■□□□ 13.4
PRPF8Q6P2Q9 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC10.76□□□□□ -0.694e-21■■□□□ 13.4
PRPF8Q6P2Q9 SMOX-211ENST00000494098 812 ntTSL 58.89□□□□□ -0.992e-9■■□□□ 13.3
PRPF8Q6P2Q9 MIIP-202ENST00000460823 955 ntTSL 512.59□□□□□ -0.392e-9■■□□□ 13.3
PRPF8Q6P2Q9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.154e-7■■□□□ 13.3
PRPF8Q6P2Q9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.88□□□□□ -0.354e-7■■□□□ 13.3
PRPF8Q6P2Q9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.364e-7■■□□□ 13.3
PRPF8Q6P2Q9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.444e-7■■□□□ 13.3
PRPF8Q6P2Q9 BAIAP2-209ENST00000572329 2133 ntTSL 212.03□□□□□ -0.484e-7■■□□□ 13.3
PRPF8Q6P2Q9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.584e-7■■□□□ 13.3
PRPF8Q6P2Q9 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.754e-7■■□□□ 13.3
PRPF8Q6P2Q9 LRP1-211ENST00000556356 5114 ntTSL 212.36□□□□□ -0.432e-8■■□□□ 13.3
PRPF8Q6P2Q9 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC9.81□□□□□ -0.842e-9■■□□□ 13.3
PRPF8Q6P2Q9 GPT2-204ENST00000562801 2092 ntTSL 212.11□□□□□ -0.478e-9■■□□□ 13.3
PRPF8Q6P2Q9 H3F3B-202ENST00000586270 468 ntTSL 221.05■□□□□ 0.968e-17■■□□□ 13.3
PRPF8Q6P2Q9 ARVCF-211ENST00000495096 2549 ntTSL 214.82□□□□□ -0.041e-7■■□□□ 13.3
PRPF8Q6P2Q9 FAM193B-203ENST00000505241 440 ntTSL 311.2□□□□□ -0.627e-9■■□□□ 13.3
PRPF8Q6P2Q9 AC018521.1-201ENST00000582262 575 ntTSL 48.28□□□□□ -1.081e-6■■□□□ 13.3
PRPF8Q6P2Q9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.55□□□□□ -0.248e-7■■□□□ 13.3
PRPF8Q6P2Q9 PITPNM2-204ENST00000451868 1639 ntTSL 1 (best)12.39□□□□□ -0.438e-7■■□□□ 13.3
PRPF8Q6P2Q9 PC-211ENST00000530259 906 ntTSL 513.75□□□□□ -0.212e-10■■□□□ 13.3
PRPF8Q6P2Q9 CYP2W1-203ENST00000415893 890 ntTSL 315.59■□□□□ 0.091e-15■■□□□ 13.3
PRPF8Q6P2Q9 SPATS2L-213ENST00000438761 887 ntTSL 55.08□□□□□ -1.67e-10■■□□□ 13.3
PRPF8Q6P2Q9 SGSM3-210ENST00000480830 997 ntTSL 515.14■□□□□ 0.017e-9■■□□□ 13.3
PRPF8Q6P2Q9 SGSM3-212ENST00000481408 951 ntTSL 513.96□□□□□ -0.177e-9■■□□□ 13.3
PRPF8Q6P2Q9 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.747e-9■■□□□ 13.3
PRPF8Q6P2Q9 SGSM3-209ENST00000478085 4218 ntTSL 210.32□□□□□ -0.767e-9■■□□□ 13.3
PRPF8Q6P2Q9 SGSM3-213ENST00000485962 2973 ntTSL 59.32□□□□□ -0.927e-9■■□□□ 13.3
PRPF8Q6P2Q9 BNIP3-203ENST00000631806 752 ntTSL 212.32□□□□□ -0.449e-9■■□□□ 13.3
PRPF8Q6P2Q9 RPL13-215ENST00000570149 435 ntTSL 211.42□□□□□ -0.581e-11■■□□□ 13.3
PRPF8Q6P2Q9 RPL13-206ENST00000472354 631 ntTSL 39.1□□□□□ -0.951e-11■■□□□ 13.3
PRPF8Q6P2Q9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.286e-7■■□□□ 13.3
PRPF8Q6P2Q9 RGL2-238ENST00000437840 2687 ntTSL 1 (best)10.88□□□□□ -0.676e-7■■□□□ 13.3
Retrieved 100 of 73,762 protein–RNA pairs in 1547.5 ms