Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS1Q9Y6A9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS1Q9Y6A9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS1Q9Y6A9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS1Q9Y6A9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 PLK5-205ENST00000642079 1969 ntBASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 AC125437.2-201ENST00000625180 2167 ntBASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPCS1Q9Y6A9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPCS1Q9Y6A9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 C17orf82-201ENST00000623772 1530 ntBASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPCS1Q9Y6A9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms