Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.72■□□□□ 0.59
HRH3Q9Y5N1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HRH3Q9Y5N1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.72■□□□□ 0.59
HRH3Q9Y5N1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HRH3Q9Y5N1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HRH3Q9Y5N1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HRH3Q9Y5N1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HRH3Q9Y5N1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.72■□□□□ 0.59
HRH3Q9Y5N1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
HRH3Q9Y5N1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HRH3Q9Y5N1 AC121338.2-201ENST00000622535 1744 ntBASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 AC097658.1-201ENST00000475555 843 ntBASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 AC091874.3-201ENST00000512672 1195 ntBASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 ITM2C-210ENST00000620962 501 ntBASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HRH3Q9Y5N1 PRORSD1P-201ENST00000295112 541 ntBASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
HRH3Q9Y5N1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 DUSP5P2-201ENST00000426873 1033 ntBASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 CYP2T3P-201ENST00000601990 817 ntBASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.69■□□□□ 0.58
HRH3Q9Y5N1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 KRT18P29-201ENST00000397031 1267 ntBASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HRH3Q9Y5N1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms