Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHGA4Q9Y5G9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 AC008694.1-202ENST00000636953 945 ntBASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA4Q9Y5G9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 AC093787.1-201ENST00000450396 207 ntBASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 AC098590.1-201ENST00000468126 897 ntBASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA4Q9Y5G9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 AC069236.1-201ENST00000604339 616 ntBASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 AC016405.3-201ENST00000607710 860 ntBASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PCDHGA4Q9Y5G9 RBM17P2-201ENST00000616397 1405 ntBASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 DUSP5P2-201ENST00000426873 1033 ntBASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 AC245052.3-201ENST00000450182 901 ntBASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 AC243732.1-201ENST00000612648 864 ntBASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGA4Q9Y5G9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms