Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 AC026366.1-201ENST00000488803 879 ntBASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 CYP2T3P-201ENST00000601990 817 ntBASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA6Q9Y5G7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 FEM1AP1-201ENST00000431297 1995 ntBASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 RPS2P52-201ENST00000469610 820 ntBASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 AC006058.3-201ENST00000606217 1069 ntBASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 AP006294.2-201ENST00000641667 209 ntBASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHGA6Q9Y5G7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PCDHGA6Q9Y5G7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
PCDHGA6Q9Y5G7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA6Q9Y5G7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA6Q9Y5G7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDHGA6Q9Y5G7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 KRT17P1-201ENST00000399211 1546 ntBASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGA6Q9Y5G7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 AC128676.1-201ENST00000454392 318 ntBASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 AP003097.1-201ENST00000530657 1135 ntBASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA6Q9Y5G7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 MCRIP2P1-201ENST00000394346 511 ntBASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms