Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 AC142381.4-202ENST00000563973 229 ntBASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHB11Q9Y5F2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 GCSHP5-201ENST00000443090 522 ntBASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
PCDHB11Q9Y5F2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 AC073130.3-201ENST00000624389 2278 ntBASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 LINC01521-201ENST00000504184 1943 ntBASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 AC098590.1-201ENST00000468126 897 ntBASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB11Q9Y5F2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms