Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 AC055733.4-201ENST00000638462 1354 ntBASIC19.17■□□□□ 0.66
AP4S1Q9Y587 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4S1Q9Y587 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 AC093484.2-201ENST00000580996 2166 ntBASIC19.15■□□□□ 0.66
AP4S1Q9Y587 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4S1Q9Y587 SYT6-210ENST00000641643 1587 ntBASIC19.15■□□□□ 0.66
AP4S1Q9Y587 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
AP4S1Q9Y587 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
AP4S1Q9Y587 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
AP4S1Q9Y587 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.14■□□□□ 0.66
AP4S1Q9Y587 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.14■□□□□ 0.66
AP4S1Q9Y587 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
AP4S1Q9Y587 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4S1Q9Y587 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
AP4S1Q9Y587 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
AP4S1Q9Y587 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
AP4S1Q9Y587 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4S1Q9Y587 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4S1Q9Y587 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4S1Q9Y587 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4S1Q9Y587 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4S1Q9Y587 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.14■□□□□ 0.65
AP4S1Q9Y587 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.14■□□□□ 0.65
AP4S1Q9Y587 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 TMEM179-206ENST00000616017 1645 ntBASIC19.13■□□□□ 0.65
AP4S1Q9Y587 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP4S1Q9Y587 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
AP4S1Q9Y587 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms