Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 NAPSB-206ENST00000562112 1266 ntBASIC26.06■■□□□ 1.76
CCNL1Q9UK58 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCNL1Q9UK58 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCNL1Q9UK58 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCNL1Q9UK58 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.06■■□□□ 1.76
CCNL1Q9UK58 AC073508.3-201ENST00000619697 1419 ntBASIC26.05■■□□□ 1.76
CCNL1Q9UK58 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCNL1Q9UK58 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCNL1Q9UK58 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCNL1Q9UK58 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CCNL1Q9UK58 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCNL1Q9UK58 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CCNL1Q9UK58 AP002982.1-201ENST00000492365 877 ntBASIC26.05■■□□□ 1.76
CCNL1Q9UK58 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC26.05■■□□□ 1.76
CCNL1Q9UK58 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC26.05■■□□□ 1.76
CCNL1Q9UK58 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCNL1Q9UK58 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.05■■□□□ 1.76
CCNL1Q9UK58 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCNL1Q9UK58 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 CFL2-205ENST00000555765 632 ntTSL 2 BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 NTF6B-201ENST00000591913 560 ntBASIC26.04■■□□□ 1.76
CCNL1Q9UK58 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 KRT18P22-201ENST00000402024 1347 ntBASIC26.04■■□□□ 1.76
CCNL1Q9UK58 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 C1orf229-201ENST00000623686 2258 ntBASIC26.04■■□□□ 1.76
CCNL1Q9UK58 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNL1Q9UK58 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNL1Q9UK58 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCNL1Q9UK58 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNL1Q9UK58 AC010947.1-201ENST00000623454 693 ntBASIC26.03■■□□□ 1.76
CCNL1Q9UK58 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC26.03■■□□□ 1.76
CCNL1Q9UK58 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
CCNL1Q9UK58 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC26.03■■□□□ 1.76
CCNL1Q9UK58 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.03■■□□□ 1.76
CCNL1Q9UK58 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNL1Q9UK58 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 DUX4L26-201ENST00000489078 1255 ntBASIC26.02■■□□□ 1.76
CCNL1Q9UK58 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 PNN-205ENST00000556530 601 ntTSL 2 BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 AC004264.1-201ENST00000608354 794 ntBASIC26.02■■□□□ 1.76
CCNL1Q9UK58 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
CCNL1Q9UK58 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCNL1Q9UK58 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC26.01■■□□□ 1.75
CCNL1Q9UK58 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCNL1Q9UK58 SLC25A3P1-201ENST00000443844 931 ntBASIC26.01■■□□□ 1.75
CCNL1Q9UK58 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC26.01■■□□□ 1.75
CCNL1Q9UK58 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC26.01■■□□□ 1.75
CCNL1Q9UK58 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CCNL1Q9UK58 AC023632.3-201ENST00000521633 145 ntBASIC26.01■■□□□ 1.75
CCNL1Q9UK58 FITM1-202ENST00000559294 800 ntBASIC26.01■■□□□ 1.75
CCNL1Q9UK58 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.01■■□□□ 1.75
CCNL1Q9UK58 AL121906.2-201ENST00000621597 723 ntBASIC26.01■■□□□ 1.75
CCNL1Q9UK58 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCNL1Q9UK58 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCNL1Q9UK58 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26■■□□□ 1.75
CCNL1Q9UK58 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCNL1Q9UK58 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCNL1Q9UK58 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCNL1Q9UK58 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCNL1Q9UK58 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26■■□□□ 1.75
CCNL1Q9UK58 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC26■■□□□ 1.75
CCNL1Q9UK58 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC26■■□□□ 1.75
CCNL1Q9UK58 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CCNL1Q9UK58 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC26■■□□□ 1.75
CCNL1Q9UK58 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26■■□□□ 1.75
CCNL1Q9UK58 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 AC104076.2-201ENST00000448912 469 ntBASIC25.99■■□□□ 1.75
CCNL1Q9UK58 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CCNL1Q9UK58 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCNL1Q9UK58 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCNL1Q9UK58 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCNL1Q9UK58 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms