Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 AC087633.2-202ENST00000565166 1439 ntBASIC20.21■□□□□ 0.83
NCDNQ9UBB6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 SLC25A3P1-201ENST00000443844 931 ntBASIC20.21■□□□□ 0.83
NCDNQ9UBB6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCDNQ9UBB6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 AC104076.2-201ENST00000448912 469 ntBASIC20.2■□□□□ 0.82
NCDNQ9UBB6 NUDT16P1-203ENST00000513809 620 ntBASIC20.2■□□□□ 0.82
NCDNQ9UBB6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 C11orf96-202ENST00000528572 1834 ntBASIC20.2■□□□□ 0.82
NCDNQ9UBB6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCDNQ9UBB6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 AL121894.2-201ENST00000602977 491 ntBASIC20.19■□□□□ 0.82
NCDNQ9UBB6 AC233723.2-201ENST00000623798 2106 ntBASIC20.19■□□□□ 0.82
NCDNQ9UBB6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCDNQ9UBB6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 LIN28AP1-201ENST00000429574 405 ntBASIC20.18■□□□□ 0.82
NCDNQ9UBB6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 REXO1L10P-201ENST00000615707 1290 ntBASIC20.18■□□□□ 0.82
NCDNQ9UBB6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 AC073508.3-201ENST00000619697 1419 ntBASIC20.18■□□□□ 0.82
NCDNQ9UBB6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
NCDNQ9UBB6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 WWOX-216ENST00000569818 525 ntBASIC20.17■□□□□ 0.82
NCDNQ9UBB6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NCDNQ9UBB6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCDNQ9UBB6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms