Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HACD3Q9P035 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HACD3Q9P035 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
HACD3Q9P035 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HACD3Q9P035 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HACD3Q9P035 AC092667.1-201ENST00000434301 2586 ntBASIC20.51■□□□□ 0.87
HACD3Q9P035 CYP21A1P-202ENST00000354927 1481 ntBASIC20.51■□□□□ 0.87
HACD3Q9P035 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HACD3Q9P035 MCRIP2P1-201ENST00000394346 511 ntBASIC20.51■□□□□ 0.87
HACD3Q9P035 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.51■□□□□ 0.87
HACD3Q9P035 AL512625.2-201ENST00000417533 625 ntBASIC20.51■□□□□ 0.87
HACD3Q9P035 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.51■□□□□ 0.87
HACD3Q9P035 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.51■□□□□ 0.87
HACD3Q9P035 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HACD3Q9P035 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.51■□□□□ 0.87
HACD3Q9P035 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.51■□□□□ 0.87
HACD3Q9P035 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.51■□□□□ 0.87
HACD3Q9P035 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HACD3Q9P035 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HACD3Q9P035 FP700111.2-201ENST00000619190 1892 ntBASIC20.51■□□□□ 0.87
HACD3Q9P035 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.51■□□□□ 0.87
HACD3Q9P035 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HACD3Q9P035 AC087633.2-202ENST00000565166 1439 ntBASIC20.51■□□□□ 0.87
HACD3Q9P035 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HACD3Q9P035 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.51■□□□□ 0.87
HACD3Q9P035 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HACD3Q9P035 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
HACD3Q9P035 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.5■□□□□ 0.87
HACD3Q9P035 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HACD3Q9P035 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HACD3Q9P035 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HACD3Q9P035 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HACD3Q9P035 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HACD3Q9P035 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.5■□□□□ 0.87
HACD3Q9P035 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HACD3Q9P035 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HACD3Q9P035 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.5■□□□□ 0.87
HACD3Q9P035 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
HACD3Q9P035 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.5■□□□□ 0.87
HACD3Q9P035 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.5■□□□□ 0.87
HACD3Q9P035 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HACD3Q9P035 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HACD3Q9P035 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.5■□□□□ 0.87
HACD3Q9P035 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HACD3Q9P035 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
HACD3Q9P035 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HACD3Q9P035 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
HACD3Q9P035 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HACD3Q9P035 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.5■□□□□ 0.87
HACD3Q9P035 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.5■□□□□ 0.87
HACD3Q9P035 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.49■□□□□ 0.87
HACD3Q9P035 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HACD3Q9P035 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HACD3Q9P035 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HACD3Q9P035 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HACD3Q9P035 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.49■□□□□ 0.87
HACD3Q9P035 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
HACD3Q9P035 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HACD3Q9P035 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.48■□□□□ 0.87
HACD3Q9P035 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HACD3Q9P035 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HACD3Q9P035 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.48■□□□□ 0.87
HACD3Q9P035 MIR663A-201ENST00000385250 93 ntBASIC20.48■□□□□ 0.87
HACD3Q9P035 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HACD3Q9P035 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.48■□□□□ 0.87
HACD3Q9P035 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HACD3Q9P035 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.48■□□□□ 0.87
HACD3Q9P035 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HACD3Q9P035 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.48■□□□□ 0.87
HACD3Q9P035 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HACD3Q9P035 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
HACD3Q9P035 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.48■□□□□ 0.87
HACD3Q9P035 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HACD3Q9P035 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HACD3Q9P035 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HACD3Q9P035 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HACD3Q9P035 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
HACD3Q9P035 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.47■□□□□ 0.87
HACD3Q9P035 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
HACD3Q9P035 RNF165-205ENST00000588679 2904 ntBASIC20.47■□□□□ 0.87
HACD3Q9P035 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HACD3Q9P035 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HACD3Q9P035 KRT8P36-201ENST00000489121 1440 ntBASIC20.47■□□□□ 0.87
HACD3Q9P035 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HACD3Q9P035 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HACD3Q9P035 CROCCP5-201ENST00000436658 830 ntBASIC20.47■□□□□ 0.87
HACD3Q9P035 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.47■□□□□ 0.87
HACD3Q9P035 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.47■□□□□ 0.87
HACD3Q9P035 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.47■□□□□ 0.87
HACD3Q9P035 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HACD3Q9P035 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.47■□□□□ 0.87
HACD3Q9P035 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HACD3Q9P035 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.47■□□□□ 0.87
HACD3Q9P035 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HACD3Q9P035 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HACD3Q9P035 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HACD3Q9P035 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.47■□□□□ 0.87
HACD3Q9P035 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HACD3Q9P035 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HACD3Q9P035 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms