Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.82■□□□□ 0.6
HPF1Q9NWY4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 TSPY20P-201ENST00000450910 630 ntBASIC18.81■□□□□ 0.6
HPF1Q9NWY4 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.81■□□□□ 0.6
HPF1Q9NWY4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 ABHD17AP1-201ENST00000358206 933 ntBASIC18.8■□□□□ 0.6
HPF1Q9NWY4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
HPF1Q9NWY4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 FAM201B-201ENST00000458407 597 ntBASIC18.79■□□□□ 0.6
HPF1Q9NWY4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 FEM1AP4-201ENST00000443167 1987 ntBASIC18.79■□□□□ 0.6
HPF1Q9NWY4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.79■□□□□ 0.6
HPF1Q9NWY4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.78■□□□□ 0.6
HPF1Q9NWY4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms