Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 AC100791.3-201ENST00000617619 330 ntBASIC20.31■□□□□ 0.84
TREX1Q9NSU2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.3■□□□□ 0.84
TREX1Q9NSU2 DPP3P2-201ENST00000416030 1696 ntBASIC20.29■□□□□ 0.84
TREX1Q9NSU2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 AC231657.2-201ENST00000624556 255 ntBASIC20.29■□□□□ 0.84
TREX1Q9NSU2 AC092437.1-201ENST00000624794 1048 ntBASIC20.29■□□□□ 0.84
TREX1Q9NSU2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TREX1Q9NSU2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 CYP2T1P-201ENST00000432607 1285 ntBASIC20.28■□□□□ 0.84
TREX1Q9NSU2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TREX1Q9NSU2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TREX1Q9NSU2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TREX1Q9NSU2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TREX1Q9NSU2 TCF3P1-201ENST00000423021 1937 ntBASIC20.27■□□□□ 0.84
TREX1Q9NSU2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.27■□□□□ 0.84
TREX1Q9NSU2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TREX1Q9NSU2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TREX1Q9NSU2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TREX1Q9NSU2 MCRIP2P1-201ENST00000394346 511 ntBASIC20.27■□□□□ 0.84
TREX1Q9NSU2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.27■□□□□ 0.84
TREX1Q9NSU2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TREX1Q9NSU2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TREX1Q9NSU2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TREX1Q9NSU2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
TREX1Q9NSU2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
TREX1Q9NSU2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms