Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 EGLN1P1-201ENST00000531623 762 ntBASIC19.13■□□□□ 0.65
CHD8Q9HCK8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 NIFKP9-201ENST00000419265 221 ntBASIC19.12■□□□□ 0.65
CHD8Q9HCK8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 AC009078.2-202ENST00000463353 338 ntBASIC19.12■□□□□ 0.65
CHD8Q9HCK8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 CYP21A1P-202ENST00000354927 1481 ntBASIC19.12■□□□□ 0.65
CHD8Q9HCK8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.12■□□□□ 0.65
CHD8Q9HCK8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 AC111152.3-201ENST00000569699 673 ntBASIC19.11■□□□□ 0.65
CHD8Q9HCK8 AC008622.2-201ENST00000617006 1229 ntBASIC19.11■□□□□ 0.65
CHD8Q9HCK8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHD8Q9HCK8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 MESTP1-201ENST00000404287 994 ntBASIC19.1■□□□□ 0.65
CHD8Q9HCK8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 AL022342.1-201ENST00000400363 863 ntBASIC19.1■□□□□ 0.65
CHD8Q9HCK8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 AC012313.10-201ENST00000623509 926 ntBASIC19.1■□□□□ 0.65
CHD8Q9HCK8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CHD8Q9HCK8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD8Q9HCK8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHD8Q9HCK8 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.08■□□□□ 0.65
CHD8Q9HCK8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.08■□□□□ 0.65
CHD8Q9HCK8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.08■□□□□ 0.65
CHD8Q9HCK8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.08■□□□□ 0.65
CHD8Q9HCK8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CHD8Q9HCK8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHD8Q9HCK8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHD8Q9HCK8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.08■□□□□ 0.65
CHD8Q9HCK8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHD8Q9HCK8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms